Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g02895 ATGGATAAGAACAATGGGGGGAATTTTTCTGAAGATGAAGTTGATACTAAATTTGATTTAAACGATGTTGAGGACTCAAAGGGTGATAACAATTTACCAGAAAATGGTGTTCAGGAGGATGTGGGAGCAAAAAATGTAATTGATTTGATTGATGAAGAATTTAGAAGTCTTCAATTTGATTCAAAGAATCATGCTTGTAAATTTTATAAGGATTATGCAAAAGCTATTGGGTTTTCTATTAGAATAAATGATATTTATACTGATGAAAGGCATGGTGTTGTTATGAGGAATTTAGTATGCAGTAGGGCGGGTACTAGAAGGGAAAAACATTTAAAAAGAATTTACCATAAACGTGAGGCGAGACCTATTACTTGTGTAGAGTGTAAAGCTAGGCTTTGTGTTCATGTAGATTATGAGATTGGAAAGTGGATAGTTACTCATTTTGAGAGATTTCACAATCATGAGTTGACACCATCTACACAGGTTCCATTTGATGCCTGCATATAG 507 0.3393 MDKNNGGNFSEDEVDTKFDLNDVEDSKGDNNLPENGVQEDVGAKNVIDLIDEEFRSLQFDSKNHACKFYKDYAKAIGFSIRINDIYTDERHGVVMRNLVCSRAGTRREKHLKRIYHKREARPITCVECKARLCVHVDYEIGKWIVTHFERFHNHELTPSTQVPFDACI. 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g02895 168 MobiDBLite consensus disorder prediction 1 37 - -
Seca2g02895 168 MobiDBLite consensus disorder prediction 1 29 - -
Seca2g02895 168 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 9 161 - -
Seca2g02895 168 Pfam FAR1 DNA-binding domain 67 158 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g02895 Seca-Chr2 86396035 86396541 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca2g02895 FAR1 4.4e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g02895 - - ccaj:109792835 111.309