Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g02878 ATGTTACAAAAAGGAACCCCCCCACCTTTAAAGTGGAATGTCCAGTTTCAAATAGCTGTTGGAATTGCTCAAGGACTAGCATACCTGCATTATGATTGTATCCCACCCATAGTGCACCGAGACATCAAACTAACAAATATACTTATCAATGTTGATATGGAGCCTTTTATAGCTGATTTTGGCACTGCCCTGTACAGGAACCTGTCTGAGGATTTTAATACTCATTGTGGAACCAGGCTAAATCTTTCATCACGTGTCGCCGGTATCCCTGGCTATATTGCTCCGGGTTGGGCTAGATCTGTATGGCTGGAAACATGCCAAATTGAGAAAATTGTTGATCCATATCTAGCAAGTGCATTTCCCAATTCAGTAGCACTAGCCAAGCATGTCACTGCAGTGTTTTTGTTGGCATTACAATGCACAGAAAAGGGATCCACATCAAAGACCGACCATGAAAGATGTTACTGGCCTTTATACAAAGGACGAGTTCCAGTTGAGGTGTGA 504 0.4266 MLQKGTPPPLKWNVQFQIAVGIAQGLAYLHYDCIPPIVHRDIKLTNILINVDMEPFIADFGTALYRNLSEDFNTHCGTRLNLSSRVAGIPGYIAPGWARSVWLETCQIEKIVDPYLASAFPNSVALAKHVTAVFLLALQCTEKGSTSKTDHERCYWPLYKGRVPVEV. 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g02878 167 SUPERFAMILY Protein kinase-like (PK-like) 6 101 IPR011009 -
Seca2g02878 167 Gene3D Transferase(Phosphotransferase) domain 1 1 107 - -
Seca2g02878 167 Pfam Protein kinase domain 17 82 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca2g02878 167 ProSiteProfiles Protein kinase domain profile. 1 167 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca2g02878 167 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 9 95 - -
Seca2g02878 167 ProSitePatterns Serine/Threonine protein kinases active-site signature. 37 49 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g02878 Seca-Chr2 85867917 85873409 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g02878 10 95 Receptor kinase-like Gene Family AT1G17750 51.163 6.78e-22 89.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Seca2g02878 Pkinase 4.5e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g02878 - - tpra:123924637 178.718