Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g02867 ATGGCTGTGTTTGGCATTGTTGAATTCCTTGTGGCGATTTTTCTCTTTGTTTCAATCCACTATTGGAGGATCAATAGACACACACCAATTACAAACTGGCCCTTGCTTGGAATGCTACCAGGTCTCTTTCTCAACATGTCCTGCATCCATGATTATCTAAACTCAGTTTTGAAACATGAAGGAGGCACTTTCATCTTTGAAGGACCATGGCTAACAAACATGAACATGGTTTTCACCAGTGACCCCATGAACGTGCAACACATCACAAGCACAAAGTTTGAAAACTATGGTAAAGGGAATGACTTTAGAGAGATTTTTGAAGTTCTTGGTGATGGGATTTTCAGGTCTGATTCAAACACATGGAAGCACAACAGAACCAAGCTTCATTCAATTTTCAAGCAGGCAAGATTTCAGCTGTTTATTCACAAAACCATTGAGAGAAAAGTTGATAATTGTTTGCTTCCATTTCTTGATCATGCATTCAGAGAAGGGGTTCAGGTGGATTTACAAGATGCTTTCCAGAGATTAACATTTGACAACATCTGCTCTGTAGTTTTAGGATTTGATCCTAATTGCCTTTCCATTGAATTACCACAAGTTGCATGTGAGAAAGCCTTCAGTGAAGCTGAGGCTTGTTTGTTCTACAGACATGTCAAGCCAAGATTCTTTTGGAAGCTGCAGAGATGGCTTCATGTTGGGAAAGAGAAGCAGTTCACAGAAGACCTGAAAATTGTTGACCAAATGTTGTATGCACAAATCACATCCAAACTCAAAGTGCAAAGGCAAAGCAGTAGCAGTAGCAAGAATAACTCACCACAGTTTGACTTGCTAAATGCCCTTATAAATGAAGGAGAAAATGAAATAGATGAGAGGTTTCTGAGAGACACAGCAATAAATCTCCTTGCTGCTGGGAGAGACACCATTAGTGCAGGGCTTACTTGGTTTTTCTGGCTGGTAGCAACACACCCATCTGTTGAAGCTAAGATTGTTGAAGAGATCAGGGAAAATTTATCAGCAACACAAGGTAATAATTGGAAGGATTTAGGTGTGGAAGGGCTTAGCAGGTTAGTTTACCTCCATGGAGCTATATGTGAAGCCTTAAGGCTTTATCCTCCAGTACCTTTTGAGCACAAGTGTGCATTACAATCTGATGTGCTTCCTAGTGGCCATAGAGTTAAGTCAAATACCATGATAGTGTACTCTCTATACTCAGTGGGAAGGGTGGAGGAAATATGGGGAGAAGATTGCTTAAAATTTAGACCAGAGAGGTGGATTTCTAAGAGAGGAGGGATTATTCATGTACCCTCTTACAAGTTCATTGCTTTCAATGCAGGACCAAGAAGTTGTTTAGGTAAGGACATAAGCTTCACTGAGATGAAGATGGTTGCTGCTGCTATATTGTGGAATTATCACATCCAAATGGTGGAAGGACACCCCATAATCCCAAGTGTTTCTGTTGTCCTTCACATGAAACATGGCTTGAAAGTTATGGTGACAAAAAGAAGCATTTGA 1512 0.4041 MAVFGIVEFLVAIFLFVSIHYWRINRHTPITNWPLLGMLPGLFLNMSCIHDYLNSVLKHEGGTFIFEGPWLTNMNMVFTSDPMNVQHITSTKFENYGKGNDFREIFEVLGDGIFRSDSNTWKHNRTKLHSIFKQARFQLFIHKTIERKVDNCLLPFLDHAFREGVQVDLQDAFQRLTFDNICSVVLGFDPNCLSIELPQVACEKAFSEAEACLFYRHVKPRFFWKLQRWLHVGKEKQFTEDLKIVDQMLYAQITSKLKVQRQSSSSSKNNSPQFDLLNALINEGENEIDERFLRDTAINLLAAGRDTISAGLTWFFWLVATHPSVEAKIVEEIRENLSATQGNNWKDLGVEGLSRLVYLHGAICEALRLYPPVPFEHKCALQSDVLPSGHRVKSNTMIVYSLYSVGRVEEIWGEDCLKFRPERWISKRGGIIHVPSYKFIAFNAGPRSCLGKDISFTEMKMVAAAILWNYHIQMVEGHPIIPSVSVVLHMKHGLKVMVTKRSI. 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g02867 503 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g02867 503 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g02867 503 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g02867 503 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g02867 503 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g02867 503 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g02867 503 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g02867 503 PRINTS P450 superfamily signature 449 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g02867 503 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g02867 503 Gene3D Cytochrome P450 12 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g02867 503 PANTHER CYTOCHROME P450 22 496 - -
Seca2g02867 503 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 442 451 IPR017972 GO:0005506|GO:0016705
Seca2g02867 503 CDD CYP86A 64 494 - -
Seca2g02867 503 Pfam Cytochrome P450 31 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g02867 503 SUPERFAMILY Cytochrome P450 20 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g02867 Seca-Chr2 85216943 85218478 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g02867 1 503 Cytochrome P450 AT4G39490 45.124 3.54e-168 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g02867 - - gmx:100785815 770.77