Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g02856 ATGTCTTATACAACAATAATAGTATATGCTTTCCTTCTTTTAACTTTCATATATCTTATATACACAATCTTCTTGTCTCCAAAACAAAGGAACGTAGCTCGAAAAAAGCCACCAGGTCCAGTAGCGCTACCAATTATCGGAAACCTCCATATGTTGGGTACCTTTCCACATCGCACACTTCATTCCCTATCCAAAAAATATGGCCCTATCATGTCCTTAAAGCTGGGACAAGTCCCAAATATTGTGGTTTCCTCCTCAGAGGCTACCGAGTTATTCATCAAGACCCACGACACCATTTTTGCAAGCCGACCAAGGATTCAATCAAGTGAGCTCTTGTTCTATGGCTCTAAGGGTATGGCATTTTCTGAGTATGGTCCATACTGGCGCATCATGAGGAAACTATGCACTTTACAACTTCTTAGCACTTCGAAAGTTGAGCTTTTTGCTCCTATTAGGAGGGAGAAGATACGTCTTATGGTAAAGTCACTAGAAAAAGCTGCAGTGGTGGGTCAAATTGTGAACCTTAGTGAGGTTGTTGAGAACCTTATGGAGGATATAATGTATAAGATGATACTGCGTCATAATAGGAATGAGCAATTTGAATTAATGAGACTGGTTCAGGAAGCAGTGACAATGATTGGAGCTTTCAATCTGGCAGATTATGTGCCTTGGCTAGCCGTATTTGATCTTCAGGGATTAAAACGAGGCTGCAAGAAAACCATTAAAGCACTTGATGAGGTGTTGGAAAACATAATAACAGAGCATGAACAAGCTTCTAATTTAGGCACAAGGAATCATAAAGACTTTGTAGACATTCTACTCTCAATGAGTGAACATAATCACATCATTAATCGAACTAGCATCAAGGCTGTTTTGCTAGATATGATTTTGGGGGCAACTGAAACATCTGCTACTGCGATTGAGTGGGCATTATCAGAACTTTTGAGGCATCCAAGGGTAATGAAAATCCTTCAACATGAGATTGAGAATGAAATAGGAATTACGAGAATGGTGGAAGAGGAGGATTTGATGAAGTTGGGTTACTTGGATATGGTGGTGGATGAGACCTTAAGACTACATCCTGTTGCAGCCTTAATCCCTCGAGAATCTAGAGAGAACATCACAATCGATGGTTATTATATAAAGAAAAAATCACGAGTCATAATAAATGCATGGGCGATAGGGAGGGATCCTAATGTGTGGTCGGATAATGCTGAAACATTTCTTCCAGAGAGATTTATGGAGAAGAAAATTAATTATCAAGGACAAGACTTTCGATCTATACCATTTGGTTCTGGTCGTAGAGCTTGCCCTGGGATTCAATTGGGTTTGATTACCGTTAGGCTAGTTATAGCTCAATTGGTTCATTGCTTTAATTGGAAACTTCCACCAAATGTTAGTCCTGCCAACTTGAATATGGAAGAGAAATTCGGGCTCTCAATTCCAAGAGCTCAACAATTGCATGCAATACCAACTTATCGTTTGACCAACGATGCTAGGCTTGAGTAG 1509 0.3989 MSYTTIIVYAFLLLTFIYLIYTIFLSPKQRNVARKKPPGPVALPIIGNLHMLGTFPHRTLHSLSKKYGPIMSLKLGQVPNIVVSSSEATELFIKTHDTIFASRPRIQSSELLFYGSKGMAFSEYGPYWRIMRKLCTLQLLSTSKVELFAPIRREKIRLMVKSLEKAAVVGQIVNLSEVVENLMEDIMYKMILRHNRNEQFELMRLVQEAVTMIGAFNLADYVPWLAVFDLQGLKRGCKKTIKALDEVLENIITEHEQASNLGTRNHKDFVDILLSMSEHNHIINRTSIKAVLLDMILGATETSATAIEWALSELLRHPRVMKILQHEIENEIGITRMVEEEDLMKLGYLDMVVDETLRLHPVAALIPRESRENITIDGYYIKKKSRVIINAWAIGRDPNVWSDNAETFLPERFMEKKINYQGQDFRSIPFGSGRRACPGIQLGLITVRLVIAQLVHCFNWKLPPNVSPANLNMEEKFGLSIPRAQQLHAIPTYRLTNDARLE. 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g02856 502 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g02856 502 PRINTS P450 superfamily signature 351 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g02856 502 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g02856 502 Gene3D Cytochrome P450 24 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g02856 502 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Seca2g02856 502 CDD CYP71-like 66 487 - -
Seca2g02856 502 FunFam Cytochrome P450 83B1 23 490 - -
Seca2g02856 502 Pfam Cytochrome P450 37 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g02856 502 SUPERFAMILY Cytochrome P450 37 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g02856 502 PANTHER CYTOCHROME P450 93A3-LIKE 13 496 - -
Seca2g02856 502 Coils Coil 241 261 - -
Seca2g02856 502 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g02856 502 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g02856 502 PRINTS E-class P450 group I signature 350 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g02856 502 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g02856 502 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g02856 502 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g02856 Seca-Chr2 84714795 84716630 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g02856 6 492 Cytochrome P450 AT3G48270 38.415 5.67e-123 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g02856 - - psat:127113357 699.893