Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g02834 ATGATTCAAATGTGGATCTGGGCTAACGCTACAAATGGATCCAGAGACATCAAGGCCAGCAACACCTTATTGGACTTGAAATATAAACCAAAGATTGCTGATTTTGGCCTGGCAAGGTTGAATACATGTGAGAAGACCCTTGATAGTGCTTCTATTGCAGGCACATTGGGTCACATGGCCCCAGAATACCTTGCTGGGTGTTCACAAACAGAGAAAGTAGACATCTACAGGAGTGGAGAACAGAAAATTTAA 252 0.4286 MIQMWIWANATNGSRDIKASNTLLDLKYKPKIADFGLARLNTCEKTLDSASIAGTLGHMAPEYLAGCSQTEKVDIYRSGEQKI. 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g02834 83 ProSiteProfiles Protein kinase domain profile. 1 83 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca2g02834 83 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 15 76 - -
Seca2g02834 83 Gene3D Transferase(Phosphotransferase) domain 1 15 79 - -
Seca2g02834 83 Pfam Protein kinase domain 15 78 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca2g02834 83 SUPERFAMILY Protein kinase-like (PK-like) 15 77 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g02834 Seca-Chr2 83790378 83790827 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g02834 15 79 Receptor kinase-like Gene Family AT4G28670 54.930 7.11e-19 77.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Seca2g02834 Pkinase 2.2e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g02834 - - ahf:112697305 93.5893