Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g02808 ATGGCAGCAGCTCCAACTCCAACAATACCATCTCATGTAAAAGCTTGGGTCTATTCTGAACATGGGAAGCCAAAAGATGTTCTGAAGTTCGATCCTAATTTGCCTATTCCCGAAGTCAAAGTAGATCAGGTACTAATCAAGGTTGTTGCTGCTGCCATTAATCCCATAGATTTTATAAAGATTCAAGGACATTACAAGGACAGTGACTCTCCTTTTCCAATTGTTCCAGGCTATGACGTTGCTGGTATAGTTGTCAAAGTTGGAACTGCAGTAAAGAAATTTAAGGAAGGGGATGACGTTTATGGTATTGTTGAGGGAAAAGATGTTGGGTCTTTGGCTGAGTATACAACTGCTGCAGAGAAAGGTTTGGCTTACAAGCCACCTAATTTGAGCTTTGCTGAAGCTGCTAGCCTTCCTTTAGCAATTGAGACTGCTTATGGAAGCCTTGAGAAAATTGGGCTTTCAGCTGGTCAATCTATCCTTGTTTTAGGAGGTGGTGGTGGTGTCGGCACACTTGTTATTCAGGTATGCTATTAA 537 0.419 MAAAPTPTIPSHVKAWVYSEHGKPKDVLKFDPNLPIPEVKVDQVLIKVVAAAINPIDFIKIQGHYKDSDSPFPIVPGYDVAGIVVKVGTAVKKFKEGDDVYGIVEGKDVGSLAEYTTAAEKGLAYKPPNLSFAEAASLPLAIETAYGSLEKIGLSAGQSILVLGGGGGVGTLVIQVCY. 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g02808 178 Gene3D - 1 160 - -
Seca2g02808 178 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 1 176 IPR044626 GO:0016628
Seca2g02808 178 SMART PKS_ER_names_mod 23 174 IPR020843 GO:0016491
Seca2g02808 178 Pfam Alcohol dehydrogenase GroES-like domain 42 101 IPR013154 -
Seca2g02808 178 SUPERFAMILY GroES-like 10 162 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g02808 Seca-Chr2 82330217 82331669 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g02808 1 136 Monolignol Biosynthesis Gene Families AT4G39330 26.277 8.88e-08 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g02808 K18980 - adu:107494963 239.195