Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g02806 ATGGCTACCCTTTCTGTTCCTGATAGTAGTGTCTGGCATGTAGGATTAAATAAGGCAGACAACAAATTTTGGTTCGTTGATGGCTGGAAAGACTTTGTTCAACGTTATTCCATTGGTGTTGGATACTTGTTGATAGATACAAAGGAAAGTCATCTTTCAATGTTCATATTTTTAATTTGGCTACATCTGAGATAA 195 0.359 MATLSVPDSSVWHVGLNKADNKFWFVDGWKDFVQRYSIGVGYLLIDTKESHLSMFIFLIWLHLR. 65
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g02806 64 PANTHER B3 DOMAIN-CONTAINING 3 57 - -
Seca2g02806 64 Gene3D - 1 58 IPR015300 -
Seca2g02806 64 ProSiteProfiles B3 DNA-binding domain profile. 1 64 IPR003340 GO:0003677
Seca2g02806 64 SUPERFAMILY DNA-binding pseudobarrel domain 2 44 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g02806 Seca-Chr2 82225421 82225615 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g02806 4 57 B3 DNA Binding Superfamily AT3G18990 62.500 4.62e-19 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g02806 - - gmx:100806715 84.3445