Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g02792 ATGGATCTAGAGACTGTGATTTACAGAAACTCAATTAAGGAGGAATCATGGAGGACAGTGTTAACTTTAGCTTATCAGAGCTTGGGAGTTGTCTATGGAGATTTGAGCACATCCCCACTTTATGTTTACAAAAGCACTTTTGCTGAGGACATTCAACATTCAGAGACAAATGAAGAAATATATGGGGTCTTGTCTTTTGTGTTCTGGACCCTTACACTGATTCCACTCCTCAAGTATGTGTTCATTGTGCTTAGAGCAGATGATAATGGTGAAGGAGGAACTTTTGCTCTGTATTCACTGCTATGCCGGCATGCCAAGGTAGGATTGTTGCCTAATATTCAGCAAGCAGATGAGGAATTAACTGAGTACACTAAAGATGGAACAGTGCCAATCGATAAGAAAAATGTTGGGTTGGTCTTGAAATCGATGTTGGAGAAGCACAGGGTGCTGCAGAGGGTGCTGCTTGTTCTGGCTTTGATAGGAACTTGCATGGTTATTGGGGATGGTGTTCTTACCCCTGCACTTTCTGTTTTCTCTGCTGTATCTGGTTTGGAGCTTTCCATGTCTAAAGAGCAGCACCGATATGTTGAAGTCCCAGTTGCTTGTGTAATACTGGTATTTTTGTTTGCGCTTCAACATTATGGGACCCATCGTGTGGGATTTTTATTTGCACCTGTTGTGATGACCTGGCTGCTATGCATCAGTGCTATTGGTTTGTATAATATTTTGCATTGGAACCCGCATGTTTATGAAGCTCTCTCTCCATTCTACATGTTCAAATTTCTGAAGAAGACTCAAAGGGGAGGTTGGATGTCCTTGGGTGGCATTCTACTCTGTATAACGGGTTCTGAAGCTATGTTTGCTGATCTAGGACACTTTTCACAGTTGTCAATTAAGATTGCTTTTACATGTTTGGTATACCCTTCTTTAATCCTGGCATATATGGGACAAGCTGCGTATCTATCCAAGCATCATGCTATTGAAAGTGATTACCGAATTGGGTTCTATGTATCTGTACCTGAGAAAATTAGATGGCCTGTTCTTGTAATAGCCATACTTCAAGCTGTGGTTGGAAGTCAAGCTATCATCACAGGTACTTTCTCAATAATCAAACAATGTTCTGCCATGGGATGCTTCCCCAAAGTCAAGATCATTCATACATCATCAAAGGTACATGGTCAGATTTATATTCCAGAGATTAACTGGTGCTTGATGCTACTTTGCCTGGCCATTACTGTTGGATTTAGAGATACAAAAAGAATGGGGAATGCATCAGGGTTGGCTGTCATAACTGTCATGCTGGTGACCACTTGCCTAATGTCTCTAGTTATAGTCTTATGCTGGCATAAAAGTGTTTTCCTAGCCATATGCTTTATATTCTTCTTTGGCTCCATTGAGGCACTCTACTTCTCTGCATCACTCATCAAGTTCCTTGAAGGGGCTTGGGTCCCCATTGCCCTCTCTTTCATCTTTCTCATTATCATGTGCGTGTGGCACTATGGCACACTCAAGAAGTATGAGTTTGATGTTCAAAACAAGGTGTCCATCAACTGGCTCCTTGGTTTGGGACCCACTCTAGGAATTGTGAGGGTTAAGGGAATTGGCCTCATACATACAGAACTTGTATCTGGGATCCCAGCTATTTTTTCTCATTTTGTTACCAATCTGCCAGCTTTTCATCAGGTTGTAGTCTTCCTTTGCATCAAATCTGTTCCAGTTCCACATGTCAGACCTGAAGAAAGGTTCTTGGTAGGTAGAGTTGGACCAAAGGAATATAGGCTTTATAGGTGCATAGCAAGGTATGGCTATCGTGACATTCACAAGGTTGATGTTGAGTTTGAGAAAGATCTTATCTGTAGTATAGCAGAATTCATACGCTCAGATACTTCAGATCATGGCCTAGGATTTGAGAGTTTTGAAGATGATACAAAGATGACAGTTATTGGGACTTCATCATCAAACTCAGAAGGTGTAAGGATGTGTGAAGATGAACAAGATATTTCTCAAATGGAAGGTGCTTCAGAACTGAGGGAAGTAAAGTCTCCTAAAAAAGTGAAGAAGAGAGTGAGGTTTGTTGTGCCAGATAGTCCACAGATTGATTTGGAAGCAAGGAAGGAATTGCAGGAGCTAATGGAAGCAAGGGATACAGGAATGGCATTTATAATGGGTCACTCATATGTGAAAGCAAAAAGAGGATCAAGTTGGATAAAGAAAGCTATTATCAATTATGGGTATGATTTCTTAAGGAGAAATTCTAGAGCACCAACTTATGCTCTAAGTATCCCTCATGCATCTACCCTAGAGGTGGGAATGATATATCATGTCTAG 2328 0.4107 MDLETVIYRNSIKEESWRTVLTLAYQSLGVVYGDLSTSPLYVYKSTFAEDIQHSETNEEIYGVLSFVFWTLTLIPLLKYVFIVLRADDNGEGGTFALYSLLCRHAKVGLLPNIQQADEELTEYTKDGTVPIDKKNVGLVLKSMLEKHRVLQRVLLVLALIGTCMVIGDGVLTPALSVFSAVSGLELSMSKEQHRYVEVPVACVILVFLFALQHYGTHRVGFLFAPVVMTWLLCISAIGLYNILHWNPHVYEALSPFYMFKFLKKTQRGGWMSLGGILLCITGSEAMFADLGHFSQLSIKIAFTCLVYPSLILAYMGQAAYLSKHHAIESDYRIGFYVSVPEKIRWPVLVIAILQAVVGSQAIITGTFSIIKQCSAMGCFPKVKIIHTSSKVHGQIYIPEINWCLMLLCLAITVGFRDTKRMGNASGLAVITVMLVTTCLMSLVIVLCWHKSVFLAICFIFFFGSIEALYFSASLIKFLEGAWVPIALSFIFLIIMCVWHYGTLKKYEFDVQNKVSINWLLGLGPTLGIVRVKGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPEERFLVGRVGPKEYRLYRCIARYGYRDIHKVDVEFEKDLICSIAEFIRSDTSDHGLGFESFEDDTKMTVIGTSSSNSEGVRMCEDEQDISQMEGASELREVKSPKKVKKRVRFVVPDSPQIDLEARKELQELMEARDTGMAFIMGHSYVKAKRGSSWIKKAIINYGYDFLRRNSRAPTYALSIPHASTLEVGMIYHV. 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g02792 775 NCBIfam potassium uptake protein 23 775 IPR003855 GO:0015079|GO:0016020|GO:0071805
Seca2g02792 775 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 13 774 IPR003855 GO:0015079|GO:0016020|GO:0071805
Seca2g02792 775 Pfam K+ potassium transporter 25 605 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g02792 Seca-Chr2 81159840 81167508 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g02792 1 773 Inorganic Solute Cotransporters AT5G14880 77.022 0.0 1220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g02792 K03549 - gmx:100793387 1367.06