Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g02785 ATGAATAAGCTCCACACAACACATTCTTGGGATTTTCTTGGATTAGACTCAGCCTACAAGAGTGACAGTGCTGCTATGGACTCTTCATCCAATGCCATTATTGGTGTCATTGACTCTGGGGTGTGTCCTGAATCAGAAAGCTTCACTGATTATGGATTAGGTCCTGTGCCCGAGAAATTCAAAGGAGAGTGTGTTACTGGTGATAATTTTACACTAGCCAATTGCAACAAGAAAAGGTTTGAAGCAAAAATTGGTCCTCTGGAAGACGTTGTTAACAAAATTTTCTTCAGGTTAGCACGAGATAGTGATGGACATGGAACACACATTACTTCTATGATTGCAGGATCCATTGTTGCTAATGCCAGCTTATTCGATATGGCCAAAGGAACTGCTAGAGGTGGTGCCCCAAGTGCCAGACTTGCCATCTACAAAGCCTGTTGGTTTGGGTTTTGCAGTGATGCTGAATGGAGAACCCTTAAAAAGGGAAGAAGGAATAAAAAGGGAGAAAGAAGGAATGAGGGACAGATTGGGGATTCTGAAAAAACAAAGCATCAAAACGTTGTCGTTTAG 570 0.4211 MNKLHTTHSWDFLGLDSAYKSDSAAMDSSSNAIIGVIDSGVCPESESFTDYGLGPVPEKFKGECVTGDNFTLANCNKKRFEAKIGPLEDVVNKIFFRLARDSDGHGTHITSMIAGSIVANASLFDMAKGTARGGAPSARLAIYKACWFGFCSDAEWRTLKKGRRNKKGERRNEGQIGDSEKTKHQNVVV. 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g02785 189 Pfam Subtilase family 30 155 IPR000209 GO:0006508|GO:0008236
Seca2g02785 189 ProSitePatterns Serine proteases, subtilase family, histidine active site. 105 115 IPR022398 -
Seca2g02785 189 SUPERFAMILY Subtilisin-like 12 152 IPR036852 GO:0004252|GO:0006508
Seca2g02785 189 MobiDBLite consensus disorder prediction 162 189 - -
Seca2g02785 189 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 154 IPR045051 -
Seca2g02785 189 Gene3D Peptidase S8/S53 domain 32 155 IPR036852 GO:0004252|GO:0006508
Seca2g02785 189 MobiDBLite consensus disorder prediction 162 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g02785 Seca-Chr2 80993830 80994683 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g02785 3 155 Subtilisin-like Serine Gene Family AT5G03620 48.795 2.80e-40 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g02785 - - gmx:106794255 240.35