Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g02758 ATGATATTTAATATGTTGACTTTATCCTTTTTCAGAAAAATGAACGAGGCATCGATTCCAATAGCCCAATGTGTAGAGAAATGGGTCAAAAATATTCATGAAAATATCGTGCAACATGACCAGGAGAGTGTTGTTGACTATACACCAGACTTGGAAATGGAGTTTGAATCTGAGGTTGCGGCCTATGAATTTTATAATGAGTACAGTAAAAGAATTGGGTTTGGTATTCGTCGAGAATATGGAAATAAAAGCAAAAAAGATGGAATTATAACTTCAAGAAGGTTCGCATGCTTCAAAGAGGGTAAACGGTAA 312 0.3526 MIFNMLTLSFFRKMNEASIPIAQCVEKWVKNIHENIVQHDQESVVDYTPDLEMEFESEVAAYEFYNEYSKRIGFGIRREYGNKSKKDGIITSRRFACFKEGKR. 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g02758 103 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 37 102 - -
Seca2g02758 103 Pfam FAR1 DNA-binding domain 63 102 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g02758 Seca-Chr2 79570327 79570638 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca2g02758 FAR1 2.8e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g02758 - K17604 psat:127085847 140.198