Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g02738 ATGCAGACATCCTACAACGAGCCATGCCTTCTCATTCTAACTGATCCAAGAACAGGTCATCAGCCCATTATGGAAGGAGCTCTTGGAAATATGCAAACTATTGCTTTTTGTGACACTGATTCTCCAATGCGGTATGTTGATGTTGGGATTCCTGCTAATAACAAAGGAAAACATACCATTGGTTGTCGCTTTTGGCTATTAGCAAGGATGGTACTGCAGATGCGGGGTACTAATCGTTCAGGGCATAAGTGGGACGTAATGGTGGATTTATTCTTCTGCAGAGAACCTGAGGAAACCAAGCCACAGGAGGATTGA 315 0.4413 MQTSYNEPCLLILTDPRTGHQPIMEGALGNMQTIAFCDTDSPMRYVDVGIPANNKGKHTIGCRFWLLARMVLQMRGTNRSGHKWDVMVDLFFCREPEETKPQED. 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g02738 104 Gene3D - 1 104 - -
Seca2g02738 104 PRINTS Ribosomal protein S2 signature 8 25 IPR001865 GO:0003735|GO:0005840|GO:0006412
Seca2g02738 104 PRINTS Ribosomal protein S2 signature 25 36 IPR001865 GO:0003735|GO:0005840|GO:0006412
Seca2g02738 104 PRINTS Ribosomal protein S2 signature 46 60 IPR001865 GO:0003735|GO:0005840|GO:0006412
Seca2g02738 104 Pfam Ribosomal protein S2 4 69 IPR001865 GO:0003735|GO:0005840|GO:0006412
Seca2g02738 104 SUPERFAMILY Ribosomal protein S2 2 89 IPR023591 -
Seca2g02738 104 PANTHER 40S RIBOSOMAL PROTEIN SA 1 104 IPR005707 GO:0003735|GO:0006412|GO:0015935
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g02738 Seca-Chr2 75428428 75429068 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g02738 1 104 Cytoplasmic Ribosomal Protein Gene Family AT1G72370 80.769 4.10e-60 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g02738 K02998 - gmx:100818292 189.504