Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g02715 ATGGATATTCATAATAATCATCATGCAACTTTTGAAGGGATTCTTGAGAATGTATGGGCTAAAATTATCAGCACTAATAGAGCAGGTGATGCAACAGAACCTTCTAACTCCTGGGATGAATTGCCTAATCTTGATGATAGAGATGGGTCTATGGAAATTCTGCAAAGGCTTCCAAGTTTAGGGAGATGGATATCAATGGGAGCTGATTTCTGGGAAGAGGTTTTAAATGGTATTCTACCTACTACAAGCAATACAGAAGATTCTGCTGACAATAAAAATTTGGAAATTGGAAGTGCTAATAAATCCAATATAAAGGAAGAAGATGCAGCTGTGAGAATAGAGAAGGCAGTTCCAAGACACTACAAGGTAGTAAGAAGAAGGCCATGGGGTAAATATGCAGCAGAGATTAGAGACTCATCAAAGAAAGGTGCTAGAATTACACTTGTTTTGTCATACCGGAGCTCCTCCACCTACAATACTACTGTGACAAAGGAAACACATGGCCCTATTATAAATCCATTTGTTCCTTTTGTCCCCAAAACTAATGGTAACAATTTAGAAGGCTATGCTACCAAAAAAACAATAGTCCCAGTTATTAGCAAGGCTTATGGTGATGATTACAACAACCATATCCCTATAATAGAGGCCTATCCCTCTTGTTTATGGATCCGGAATTTTGGAATTTCAGTTCATAAGCAGAAATCTATGGATGCAGAGAACTAA 723 0.379 MDIHNNHHATFEGILENVWAKIISTNRAGDATEPSNSWDELPNLDDRDGSMEILQRLPSLGRWISMGADFWEEVLNGILPTTSNTEDSADNKNLEIGSANKSNIKEEDAAVRIEKAVPRHYKVVRRRPWGKYAAEIRDSSKKGARITLVLSYRSSSTYNTTVTKETHGPIINPFVPFVPKTNGNNLEGYATKKTIVPVISKAYGDDYNNHIPIIEAYPSCLWIRNFGISVHKQKSMDAEN. 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g02715 240 Gene3D AP2/ERF domain 119 159 IPR036955 GO:0003700|GO:0006355
Seca2g02715 240 ProSiteProfiles AP2/ERF domain profile. 120 148 IPR001471 GO:0003700|GO:0006355
Seca2g02715 240 PANTHER DNA-BINDING DOMAIN 99 148 IPR044808 GO:0003700|GO:0009873
Seca2g02715 240 SMART rav1_2 120 167 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g02715 Seca-Chr2 74341100 74341822 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g02715 14 148 AP2-EREBP Transcription Factor Family AT4G18450 37.324 2.97e-15 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g02715 - - gmx:112999553 224.557