Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g02702 ATGAAGAGGCGAAGAAGAATGAAAAGAACGTGTATTGTTTGGATTGTTGCATCAGTCTCTGCCCTCACTGTTTGTCCCCTCATCGCCCTCACAGACTCTTACAGGTTCTGCTTTCTCAATTTCACCCAAACATTACCTTACATTTTCTCTATTCTTGGTCTGAATTTAGCATTAATGCCTTCTTTTCAGATAAGAAGATATGTCTATCACGATGTTATAAGGTTGGATGATGCTGCAAAGTTAATTGACTGCACTTCTGTTCAATCCTACACAACCAACAGTGCAAAAGTGGTATTTCTAAACCAAAGGCCACAGACAAGGAACTTCAGAGGCTCCGGCAATTTCTGCAGCACCTGTGACAGAAGTCTGCAAGACCCATACCACTTCTGCTCTCTCTCTTGCAAGATCAATCACCTCATCAGAACAGCGGGTTCTCTCTCCGGTTACCTTTACGAGTGCAACTACCTTGCCTTGCCGGATTCTGGGCTCGACGACAGTCTCATGACCCCTGACTCGGTCCTCGAACCGGCGAGAACATCGTCCAGTTCGGGTGGTTATGATGGGGTCGATTGCAGGACCACACTTGCTTGCACTGCCACCACTGAGGTTGTAAGGAAGAAGAGGAGCGGCGGTTCCAATTTCCGGCCACCGTGCCGGCCGGCATGCTCGCCAGTGTCGGAAATCTCGGCCGGTCTGATGAACCGGAGGAAGGGGACACCCCAGAGGGCCCCACTCTATTGA 741 0.4953 MKRRRRMKRTCIVWIVASVSALTVCPLIALTDSYRFCFLNFTQTLPYIFSILGLNLALMPSFQIRRYVYHDVIRLDDAAKLIDCTSVQSYTTNSAKVVFLNQRPQTRNFRGSGNFCSTCDRSLQDPYHFCSLSCKINHLIRTAGSLSGYLYECNYLALPDSGLDDSLMTPDSVLEPARTSSSSGGYDGVDCRTTLACTATTEVVRKKRSGGSNFRPPCRPACSPVSEISAGLMNRRKGTPQRAPLY. 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g02702 246 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 62 245 - -
Seca2g02702 246 Pfam PLATZ transcription factor 65 136 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g02702 Seca-Chr2 73542814 73545099 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Seca2g02702 PLATZ 2.5e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g02702 - - pvu:PHAVU_008G142900g 350.517