Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g02695 ATGAAGGCCGTGCCCCTACCCTTTCAGGAATACAGAGGGAAGGGGGTGTTAGATTTTAGTTCGGGTGTTTCAGATTCGTTGTTAGTACCACAGCAAGAGCAATTTCTGCAAAGGTGGAATACCCGCAGGGAAAACTGTTGCTATGTGGGCATTGAGCCCACCCACCCAAGTCCTCCCATATCCTCCTCCTCTACACTGTCTTCCTCACACGGCAGCAGCGGCGGTGGCGGTGGCTGTGGCTCCACGGACAGCACCACCGGCGTGGCGGCGAAGGTCTCAGGTGAAAAGGAGAACAATCCACCCCAAGCAGGGTTAGAAGTTGGTCAGGGAAGATGTGGGATGGGAATGGAGGATTGGGAGAGTGTGTTGTCTGACTCACCAGGTCAAGATCATTCTATTCTGAAATTGATTATGGGGGACATTGAGGACCCATCTGTGGGATTGACCAAGCTTTTACAGGGTGGAAGTGGTTCTCAGGATGTTGAATTGATTGGAGTGGGTTCTAGTCTGGTGGATCAAAGTTCAGTGCTTGACCCTATTTCTGGTGTCAACTTTGTGAGTAGTAACCCTTCTTCTGGTTCTGGGAATTGTTCAGATTTCCCCTTCAATCCGCACCACAATGTTAACTCCAATGTTTCCAGAGTAGGTTCTGGTGTGAATCCTAACCCTTTGTTCCCTGCTTCAGTTAGCAATCTCTCACCAGTTTCACTCCCTCAGGGTGTGTTTCAGCCACAACAACAACAGCATCAGTCAATAGAGTCTCTTGATGAGAAGCTGCAGGTTCTCAATCCCCAGTTCATTTTGAACCAAAACCAAGCACAGTTTATGCCCAACCCTAGCTTGGTCTTGCCTTTGACATATGCCCAGCTGCAGGAACATCAGCTTCACCCTCAGCCTCCGGCGAAACGCCTGAATTGCGGCCCTGCTGGACCAAACTATCAGGTTCCAAAAACACCCTTTTTGGATTCTGGCCAAGAGATGTTTCTTAGGAGGCAGCAGCAGCTTCAACTGCTTCCACACCATCTGCAGCAGAGGCCATCATCCATGGTGGTGTCACCAAAGCAGAAAATGGTGAACCCCAGTGGCAGCGAAGATGTGGCAACCCACCAGCTTCAACAGGCCATAACTGACCAGCTATTCAAGGCTGCAGAGCTGATCGATGCTGGTAATCTGGAACTCGCGCACGGGATATTGGCGCGGCTCAATCACCAACTTTCTCCCATTTGGAAGCCTTTTCAAAGGGCTGCTTTTTATTTCAAGGAGGCCTTGCAACTACTTCTGCATTCAAATGCCAACAAAAGTTGCTTGACCTTCTCACCCACTGGCCTATTGCTCAAGATTGGTGCTTACAAATCATTCTCAGAAATCTCACCAGTTCTGCAGTTTGCTAATTTCACTTGTAACCAAGCACTTCTTGAAGCTGTAGAAGGGTTTGATCGCATTCACATAATAGATTTTGATATTGGGTTTGGTGGACAGTGGTCTTCATTCATGCAAGAATTAGCACTCAGGAATGGTGGTGCACCTGCACTCAAGATCACTGCATTTGCGTCACCCTCCCACCATGATGATATTGAGCTCAGTTTCACTCACGAGAATTTGAAGCAATATGCTGTTGAAATTAACATGTCCTTTGAGCTTGAGATTCTGACACTTGAGTCTTTGAATTCTGCTTCCTGGCCCCAGCCACTTCGTGATTGTGAAGCTGTTGTGGTTAACTTGCCTATTGGCTCTTTCTCAAATTACCCTTCATATCTTCCTTTGGTCCTACGCTTTGTGAAGCAGCTTATGCCAAAAATTGTGGTTACATTGGACAGAAGTTGTGATCGAACTGATGCACCATTTCCTCAGCATCTGATTTATGCACTTCAGTCTTATACAGGGCTGCTTGAGTCACTTGATGCTGTTAATGTTCACCCAGATGTCCTTCAGATGATAGAGAAGTATTATCTTCAACCAGCAATGGAGAAACTTGTTTTGGGTCGTCAGTGTTTGCAGGAAAGAACACTTCCTTGGAAAAACCTGCTCTTGTCATCCGGGTTCTCACCGTTGACATTTAGTAACTTCACAGAGTCTCAAGCAGAGTGTTTGGTGCAGAGGACTCCTGGTAGGGGATTCCATGTGGAGAAGAGGCAGTCTTCCCTTGTTCTATGCTGGCAGAGGAAGGATCTCATCTCAGTATCAACTTGGAGATGCTGA 2199 0.4739 MKAVPLPFQEYRGKGVLDFSSGVSDSLLVPQQEQFLQRWNTRRENCCYVGIEPTHPSPPISSSSTLSSSHGSSGGGGGCGSTDSTTGVAAKVSGEKENNPPQAGLEVGQGRCGMGMEDWESVLSDSPGQDHSILKLIMGDIEDPSVGLTKLLQGGSGSQDVELIGVGSSLVDQSSVLDPISGVNFVSSNPSSGSGNCSDFPFNPHHNVNSNVSRVGSGVNPNPLFPASVSNLSPVSLPQGVFQPQQQQHQSIESLDEKLQVLNPQFILNQNQAQFMPNPSLVLPLTYAQLQEHQLHPQPPAKRLNCGPAGPNYQVPKTPFLDSGQEMFLRRQQQLQLLPHHLQQRPSSMVVSPKQKMVNPSGSEDVATHQLQQAITDQLFKAAELIDAGNLELAHGILARLNHQLSPIWKPFQRAAFYFKEALQLLLHSNANKSCLTFSPTGLLLKIGAYKSFSEISPVLQFANFTCNQALLEAVEGFDRIHIIDFDIGFGGQWSSFMQELALRNGGAPALKITAFASPSHHDDIELSFTHENLKQYAVEINMSFELEILTLESLNSASWPQPLRDCEAVVVNLPIGSFSNYPSYLPLVLRFVKQLMPKIVVTLDRSCDRTDAPFPQHLIYALQSYTGLLESLDAVNVHPDVLQMIEKYYLQPAMEKLVLGRQCLQERTLPWKNLLLSSGFSPLTFSNFTESQAECLVQRTPGRGFHVEKRQSSLVLCWQRKDLISVSTWRC. 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g02695 732 Pfam GRAS domain family 376 731 IPR005202 -
Seca2g02695 732 ProSiteProfiles GRAS family profile. 366 731 IPR005202 -
Seca2g02695 732 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 341 727 IPR005202 -
Seca2g02695 732 MobiDBLite consensus disorder prediction 50 110 - -
Seca2g02695 732 MobiDBLite consensus disorder prediction 56 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g02695 Seca-Chr2 73258495 73260693 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g02695 374 732 GRAS Transcription Factor Family AT4G00150 60.221 8.33e-142 426
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Seca2g02695 GRAS 1.5e-89 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g02695 - - gmx:100805945 1115.52