Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g02658 ATGGATGATAACAATGAGGGTGTGAGCAACCATGAAGTTGGGTTGGATGATAATGAGCAGGATAAAACTTATGTTCAGAGTTTGCTGCAGGGGATGGGATTTGATAGTGAAAATGATTTTGTTAGTGTTGATCCTAGTTTGCTTAGTGCTGAACTTGTGATGACTTTTCACTTCTCAAACCTTGAAATGGCTTATAACTTCTATAATTGGTATGGGAGGATATTAGGTTTTTCTGCTCGTAAGGGTAAAGTCAGGAAAAACAAGGATTATGAAATCGTGGAGAAGACATTTTTTTGTCATAGGGAAGGCTATAGGAAGAAAAAAGAAGAAGAGGAACAAGAGCAAGCAACTCGTGAAAGTAGGCCGGAGACGAGGACTAGATGTAAAGCAAAAATGAAGGTACGTCTTGATGGTATTACTGGGAGATGGCGTGTCTCTAAGTTTGTAGGTGTACATAATCATGATCTGTTAGAAAAAATACATTCATCCATGTTACCTGCTCATAGAAAAATTAGTGATGCTGACATTATGCAAATAAACAATTTACGAATGGTAGGTATAAGTACCCCCCTCATTTATGGGTCATTTGCAAGCCAATCTGGAGGCTTTCATCATGTGGGATTTTCTAAGAGATATTTATAA 642 0.3769 MDDNNEGVSNHEVGLDDNEQDKTYVQSLLQGMGFDSENDFVSVDPSLLSAELVMTFHFSNLEMAYNFYNWYGRILGFSARKGKVRKNKDYEIVEKTFFCHREGYRKKKEEEEQEQATRESRPETRTRCKAKMKVRLDGITGRWRVSKFVGVHNHDLLEKIHSSMLPAHRKISDADIMQINNLRMVGISTPLIYGSFASQSGGFHHVGFSKRYL. 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g02658 213 MobiDBLite consensus disorder prediction 1 20 - -
Seca2g02658 213 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 31 203 - -
Seca2g02658 213 Pfam FAR1 DNA-binding domain 66 157 IPR004330 -
Seca2g02658 213 MobiDBLite consensus disorder prediction 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g02658 Seca-Chr2 71804415 71806058 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca2g02658 FAR1 1.7e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g02658 - - tpra:123913749 165.622