Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g02635 ATGGATTTAAATAGTGATGATTCGGCTGTTAATCTGGATGATGATAGAGACCTTATATTTAGTGATTCTTCTAGTTCTATCGATGATGAAATTCATAATGAAAATGATAGAGTTATTGATTCTGATGATGAAGTTAATGAAGAAGAGGTAGACAGTGATGAGGGAAATGATAATATGGATGCAGAAGTTGGAAGGGGGGTGTCAAGGAGGATAATTGATTTGACAAGTGATGATATATCTGCATTGGAATTCTGTAGTGAAAATGATGCTTTCAATTTTTACTTTTCTTATGCAAGATGTCATGGATTTGCTGTGAGGAGGGATGATGTAATTAAAGACAGTAAAGGTATGCTCATAATGCGACAGTTCTTATGTAGTAGGGCTGGTAAAAGGGACAAAAAGCATTTGATTAGGTTAGATCGAAAAAAGGAACATAGGCCTCTTACTCGAACAAATTGTCAAGCTAAGTTGAGGGTTCGGTTTGATTATAAGACTGGGAAATATAAGGTTGTTTCCTTTTTAGACTCTCATAACCATGAATTGACCCCTGCTAAATTTGTACCTTTAATTCCTGCATATCGTGGTTTGAGTGATGGGGACAAAGCCCAAGTTGATGCATTGCATTCTCATGGTGTTAGACCATGTCAGATAATGGGTTTTCTTGTTGATAAAAAAGGAGGTTATAGAAACGTTGGTTTTTCAAAGAAAGATTTATACAACTACATAAATATGGTTAAGAGGGGTAGGATAAAAGATAAGGATGCAGTGGCTGGGTTAAGTTATTTGCAAGGAAAGGCAGATAATAATCCAATGTTTTTTTCAAGATTCTTATGTTCTGATGATGGGAAACTCACTCATTTGTTTTGGTGTGATGAAATCATTCGGGCAGACTATCAATTTTTTGGTGATGTGCTTGCATTTGATGCAACCTACAAGAAGAATAGGTATAAATATCCACTGGTGATATTTTCCGGCAAAAATCACCACTCTCAGACGTTTATATTTGGGTGCGCACTCATTGCCGATGAAACAATCGATACTTATAAGTGGGTTTTAAGAATGTTTTCAGAAGCAATGTTCAACAAGCATCCAGCTACAGTGGTGACTGATGGTGATGGTGCAATGAGGGAAGCTATTAAGGTAGTATTTCCAAATGCATCTCATAGGTTATGCGGCTAG 1179 0.3656 MDLNSDDSAVNLDDDRDLIFSDSSSSIDDEIHNENDRVIDSDDEVNEEEVDSDEGNDNMDAEVGRGVSRRIIDLTSDDISALEFCSENDAFNFYFSYARCHGFAVRRDDVIKDSKGMLIMRQFLCSRAGKRDKKHLIRLDRKKEHRPLTRTNCQAKLRVRFDYKTGKYKVVSFLDSHNHELTPAKFVPLIPAYRGLSDGDKAQVDALHSHGVRPCQIMGFLVDKKGGYRNVGFSKKDLYNYINMVKRGRIKDKDAVAGLSYLQGKADNNPMFFSRFLCSDDGKLTHLFWCDEIIRADYQFFGDVLAFDATYKKNRYKYPLVIFSGKNHHSQTFIFGCALIADETIDTYKWVLRMFSEAMFNKHPATVVTDGDGAMREAIKVVFPNASHRLCG. 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g02635 392 MobiDBLite consensus disorder prediction 19 39 - -
Seca2g02635 392 Pfam FAR1 DNA-binding domain 92 182 IPR004330 -
Seca2g02635 392 MobiDBLite consensus disorder prediction 19 62 - -
Seca2g02635 392 PANTHER OS01G0519700 PROTEIN 79 391 - -
Seca2g02635 392 MobiDBLite consensus disorder prediction 40 57 - -
Seca2g02635 392 Pfam MULE transposase domain 304 391 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g02635 Seca-Chr2 70017897 70019075 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca2g02635 FAR1 5.6e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g02635 - - ccaj:109794460 441.425