LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca2g02560	ATGGAATTTAACAAGGACTTTATGGATGATTGTTCTACATTTTGGACTGATGAAAATTCTGAGAGCAACCGAGATGAGTCACGTAATGGGGATGGAAACCCGGTGGGAGACCAAGGTGGGCTGTCATGGGGCGGGAGGATGATACATGAACTAACACATGATGACATTAGACGTCTAGAGTTCGGTTCTGAGGGTGAGGCATATAGTTTTTATTCGGATTATGCTAAACAACGAGGGTTTGCTGTGAGGAAAGATGATATTGAGCGAAATGAGAATGGTGATATTGTTAAGCGGTATTTAGTGTGTAATAAGGAGGGAACAAGGGACAAGAAACACTTGGAGAGAAAGGACAGAGTGAAGGAGGCGAGGCCAATTACTCGTGTGCAGTGCACAACAAGGATGCGTGTTTACTTAGATATGAGGAGTGGGAAATGGAAGGTGTCTGCATTCCACGACGATCATAACCATGAGTTAACTCCTCCAACGTATGTTCACATGATGTCAGCTTATAGACGATTGAGTGAATCTGATAAAGCTCAAATTGATACCCTGCATGCAGCCGGTGTGAGAACTTGCCATATTATGAGTTTTATGATTGGACAGAAAGGGGGACATGGTGAATTAGGTTTCTATAAAAAGGACATGTATAACCACATTGATAAACAGAAGAGGGCTAATATAGAGGATGGTGATGCATTTGCAGCGCTGTGTTATTTGCAGGGAAAGTATAACAGTGATCCACTAATACATTGCATGTTCAGGACAACAGACGATGGTAGACTGCAGGACCTATTTTGGTGTGACGGTGCAAGTCGTGTTGATTATCAGTGTTTTGGAGATGTAATAGCATTTGACACGACTTATAAGAAGAACAAATATAACAAGCCTTTGGTTTTTTTTTTTGCGGGTACAACCACCATGGGGAGACATGTAATTTGGTCGTGCACTTGTTGCTGA	957	0.4211	MEFNKDFMDDCSTFWTDENSESNRDESRNGDGNPVGDQGGLSWGGRMIHELTHDDIRRLEFGSEGEAYSFYSDYAKQRGFAVRKDDIERNENGDIVKRYLVCNKEGTRDKKHLERKDRVKEARPITRVQCTTRMRVYLDMRSGKWKVSAFHDDHNHELTPPTYVHMMSAYRRLSESDKAQIDTLHAAGVRTCHIMSFMIGQKGGHGELGFYKKDMYNHIDKQKRANIEDGDAFAALCYLQGKYNSDPLIHCMFRTTDDGRLQDLFWCDGASRVDYQCFGDVIAFDTTYKKNKYNKPLVFFFAGTTTMGRHVIWSCTCC.	319

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca2g02560	318	PANTHER	OS01G0519700 PROTEIN	59	299	-	-
	Seca2g02560	318	MobiDBLite	consensus disorder prediction	14	43	-	-
	Seca2g02560	318	Pfam	FAR1 DNA-binding domain	69	159	IPR004330	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca2g02560	Seca-Chr2	67117895	67118851	Dispersed/Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Seca2g02560		FAR1	1.1e-21	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca2g02560	-		-	ccaj:109792835	325.865