Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g02554 ATGATTTCTTTTAGGAAAAGGCCTTCTTCCTATAGAGACTTCATTTCTCTCTCTAGGACAAGCATAGATAAAAACCAGGAGAAGAAGAGGAAGAACCCTCTTGACACTCTTTTGAGTCAAGGAGATCACGTGGCACGCAAGAGAGTAAGGGCGGCGTTAAGGTTGCTCGATACTAGTAGAAACTACGCGAAGAAAGGGGTTCCTAGAGTACTTCAGAAAGCGACTAAGGATCTTCAAGTTAAAGGCAAGTTCATTAACCCTGGGAAACAAATTATAGGATCCGTCCCTGGAGTTGAAGTCGGTGGTGAATTCCTTTACTGGAGGGAGTTTAACGTTGTTGGCCTTCATCGCCAGATCACCCGTGGCATAGATTATGTGAATGTTAATGGCATGTTGCTTGCTACCAACGTTGTTTCAGGAGGGGTTTATGATGATGCTGTAGAGGATACAAATGAATTAGTTTATATGGGGAGGGAGGGAATGTGA 486 0.4362 MISFRKRPSSYRDFISLSRTSIDKNQEKKRKNPLDTLLSQGDHVARKRVRAALRLLDTSRNYAKKGVPRVLQKATKDLQVKGKFINPGKQIIGSVPGVEVGGEFLYWREFNVVGLHRQITRGIDYVNVNGMLLATNVVSGGVYDDAVEDTNELVYMGREGM. 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g02554 161 Gene3D - 73 161 IPR036987 -
Seca2g02554 161 ProSiteProfiles YDG domain profile. 93 161 IPR003105 -
Seca2g02554 161 SUPERFAMILY PUA domain-like 83 160 IPR015947 -
Seca2g02554 161 Pfam SAD/SRA domain 92 160 IPR003105 -
Seca2g02554 161 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 23 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g02554 Seca-Chr2 66994094 66994579 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g02554 89 160 Su(var)3-9 homologs AT1G73100 40.789 4.13e-11 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g02554 K11420 - thj:104807934 110.923