Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g02552 ATGGCACGCAAGAGAGTGAGGGCGACATTGAGGTTGCTTGATACTACTTGTAGAAACTACGCGAAGAAAGGGGTTCCTAGAGAACTTCAGAAAGCGACTAAGGATCTTCAAGTTAAAGGCAAGTTCATCAACCCTGGGAAACAAATTATAGGATCCGTCTCTGGAGTTGAAGTCGGTGATGAATTCCTATACTGGAGGGAGTTTAACGTTGTTGGCCTTCATCGCCAAATCACCTGTGGCATAGATTATGTGAATGTTAATGGCATGTTGCTCGCTACAAGCATTGTTTCGGGATGGGTTTATGATAATGATGTAGAGGATACAAATGAGTTAGTTTATATGGAGGAGGGAGGGAATGTGATAAAGAGAGAAAGAAAACCTAAAGATCAGAAACTTAACGGGGTAATCTTGCTTTGA 417 0.4197 MARKRVRATLRLLDTTCRNYAKKGVPRELQKATKDLQVKGKFINPGKQIIGSVSGVEVGDEFLYWREFNVVGLHRQITCGIDYVNVNGMLLATSIVSGWVYDNDVEDTNELVYMEEGGNVIKRERKPKDQKLNGVILL. 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g02552 138 Gene3D - 34 137 IPR036987 -
Seca2g02552 138 SUPERFAMILY PUA domain-like 40 135 IPR015947 -
Seca2g02552 138 SMART G9a_1 46 137 IPR003105 -
Seca2g02552 138 ProSiteProfiles YDG domain profile. 51 138 IPR003105 -
Seca2g02552 138 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 2 133 - -
Seca2g02552 138 Pfam SAD/SRA domain 50 133 IPR003105 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g02552 Seca-Chr2 66968466 66968882 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g02552 31 132 Su(var)3-9 homologs AT1G73100 40.566 1.36e-14 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g02552 K11420 - lang:109363359 132.88