Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g02548 ATGAGGCAATTCTTCATAAATTTCTCCCTTATAACAACCCTGCCAATTCCTCTGACCATTTTCGCATGTATGAATTTCAAGGTCCGTCGATGCACTCGTAGCCGGAGCCATGATTGGACCGAGTGTCCCTTTGCACACCCCCATTGGGAAATATGA 156 0.4615 MRQFFINFSLITTLPIPLTIFACMNFKVRRCTRSRSHDWTECPFAHPHWEI. 52
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g02548 51 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Seca2g02548 51 PANTHER UNKEMPT FAMILY MEMBER 21 48 IPR045234 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g02548 Seca-Chr2 66894360 66894515 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g02548 21 47 C2H2 Transcription Factor Family AT5G12850 66.667 7.48e-10 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g02548 - K23047 mof:131152059 59.6918