Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g02493 ATGTTTTCATTTCGTCTTGACTTTGAGGACTCCCCAAATCATCAAGAATTTGAAAGTACGAAAAATTCAGATTTACCATTCTTTAATCTTAACTCCATAGTTGCTGCAACAGACAATTTCACTACAGTTAACAAGCTTGGTCAAGGTGGTTTTGGTTCTGTTTATAAGGGTGTCCTGAGTAATGGAATGGAAATAGCAGTGAAGAGGTTGTCAAAGTATTTTGGACAAGGCATAAAAGAGTTTAAAAATGAGATTGTTTTGATTTCAAAGCTTCAACACAGAAATCTTGTGAGGATCTTAGGTTGCTGCATTCAGGGAGAGGAGATGTTAATATATGAGTATTTGCCAAACAAAAGCTTAGACTCTTTCATTTTTGGTATGTCTTGTTTTCACATTTACTGCATTAGTACTTGA 414 0.3478 MFSFRLDFEDSPNHQEFESTKNSDLPFFNLNSIVAATDNFTTVNKLGQGGFGSVYKGVLSNGMEIAVKRLSKYFGQGIKEFKNEIVLISKLQHRNLVRILGCCIQGEEMLIYEYLPNKSLDSFIFGMSCFHIYCIST. 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g02493 137 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 6 114 - -
Seca2g02493 137 SUPERFAMILY Protein kinase-like (PK-like) 25 127 IPR011009 -
Seca2g02493 137 Gene3D Phosphorylase Kinase; domain 1 5 114 - -
Seca2g02493 137 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 18 128 - -
Seca2g02493 137 ProSiteProfiles Protein kinase domain profile. 40 137 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca2g02493 137 Pfam Protein tyrosine and serine/threonine kinase 42 124 IPR001245 GO:0004672|GO:0006468
Seca2g02493 137 ProSitePatterns Protein kinases ATP-binding region signature. 46 68 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g02493 Seca-Chr2 65119258 65119842 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g02493 1 125 Receptor kinase-like Gene Family AT4G23190 53.175 1.39e-38 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Seca2g02493 PK_Tyr_Ser-Thr 7.6e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g02493 - - gmx:100812814 209.149