Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Seca2g02491 | ATGATTGAAATCGATGACAATGATGATGATGATAGTGGCTCTCAAGAGAGGTTGGTGCATTCTGAGAAGAAGGGGTTTCAGGCTGTTGTTGATGTTAAAGAGGAAGAAAAGAGTGAGGGTATTGAAAGTTATGTATTTTCTGAGAAAGGTGAAAAATTTGGGAATGATGAAGGGTTGGAGCATTCTCAGGAGAAGGGGTTTCAGGGTTTTGTTGATGATAAAGAAGGAGAAAAGAGTGAGGAAGATAGAGGAAGTTATGCATTTGCTGATAAAGGTGAAAATTTTGGGAATGATAACTGTGGTTGGGGACCTGCAAACCCAATCACAATAGATTCAGATAGGGGTTGTGACTCTGAGGAAGAACGTGGTTCAGCTGGTGATGATATTTGGTCTTCATCAACGGGTAGTGAGGATGTTGAGACTAGTGATGAAGATTTTCTAATTGATGAAGACGAGTATGAAATTTTGAGCAGTGAAGAAAGTCCTAGCTCTTCTGATGATGAGAAGGAGAAAGAATGGAGGAGATATAGCAAGGAGAGGGTGAGAAAGGTGGAGACTGAAAGCAGTGGAATTTGCAGAAGAAGTGGTGAAAGGAAATATAAGCAGGTGGAGGAGGAGGAGGTGGAGCTTGAAAACACTCCATCCTCGGTAAACAATGATGAATGTGGTGTGCAAGATCAAGAGGAATGGAAGGATGTAGATTATGATACTGAGACCTCTAGTGAACTCATGATGAAGGGTTCTTCCCAGCTTTCTCAAGAGGAGGATAATAAGGCAGCAAAGAAACATGAGGGAAAGAGAGTAGAAAGAAGGGTAAAAAATGTCAGTGATGATGTCGAAGGTTTTGGTGATTACCAGAAGAGTTTAGGTTGCTCTAGGCCTTCTGAAGATGAAGCACAGAAGGAAAAGAAGAAACAAGCTAATGACTCTGTGAATCTTGATGGTTATAAAGGAAAAGGGCATCATGAAAAAGGTACTAGTGTGAGAAAAGTTTCTTCATTGCTAAGAAACCAAGAGAAGATAGGAGATTCAGCTAAACATAAAACCATGGAGAACAAGGAAAGGGAGCATAAGGATGGAATTTACAGCAGTAATCGTGAGAAGAAGGCATGGGTGGGCAATGAAGCTGGTTACAGAAATGAGCTGCGGAAGGAGCAACGGTTAATTGAACTCCTTGCTGAATGCTTCTCAGGAATGTATAACTCTGTTAAAGGAGACTCATATGGGTTGGAAGAAAAGAATGATGATGTTTATCAGCTAGAAACTCAGCCACCAGCTTGTGGGGAAACACAGCCATTAAAGTGGAAGGAGCTTAGGGAGGTTGAACCACCACTGGAAAGAACAGAGTCTGAGAAGGAGTTGGATATGTTGTGGAAAGAAATGAATGAAGCGCTTGAATATGAAGAAATTGCTTCCCGGGTGGGCAATATAGGGATAAATGAAGAAATACAAAACACAGGGAGTTCAACCTTTATCTGTAAACACGAATTTTATCTTGACGAGCAGATTGGGGTATATTGCAAATTTTGTTATTATATTGCTACTGAGATCAAATATGTCTCACCACCCGTGGTTGATAGATTTCCCTTGGAAGGATTAGGAAAAACAGTGTCATCTGGTGGAGATAAAGTTTCACTCTTTGAGATTAATAATTCTGGTAGTGACTCAGAGGCTACTTTCATTCATAATGAAGGCACAGTTTGGGACCTGATTCCTAATATCAAGGAAACCTTATATCCTCATCAACAAGAAGGTTTTGAGTTCATTTGGACAAATTTGAGGGGAGCTATTGACCTCCACAAGGTGAGGAGGGCTGATCCTTGTAGTGTGGGTGGATGCATCATTTCTCATGCTCCTGGAACTGGGAAGACGCGTTTAACCATGGTGTTTCTTCAGGCATACTTGGAAGTATTTCCAAAATGCCGACCAGTTATCATTGCTCCTGCTAGCCTATTGCTTACTTGGGAAGATGAGTTCAAAAAATGGGACATAGGAATTCCATTCCACAACCTTAACAATCTTGAATTATCTGGAAAAGAGCACATTAATGCCACTAACAAAGTTGATTGGTCTAGAAATCCACAGCTGAATAAGAATGCTGTGCGTATGGTGAAGTTATATTCATGGTACCAAGAGAAAAGCATCTTGGGAATTAGCTACCATATGTATGAGAAGCTCGCAGGAAAAAATGGAAAGGGGAAAATAAAGAAGAAACATGCAAGTGCGAAGGTGGAGAACACTGAAAGTGGTATGATGGGAAAGGCTCTGCGTGATGCTCCTGGTTTGTTAGTGCTAGATGAAGGGCACACACCTAGAAACCAGCGTAGTCTTATTTTTAAGGTTCTTTCAGAAATTCAAACTCAGAAGCGCATTATCCTTTCAGGGACTCCTTTCCAGAACAATTTTCTGGAACTGTATAACACTCTGTGCTTAGCAGTTCCATCATTTCCTGACACAATACCACATGAACTGAAAAAGTTTTGCCAGAGTAGGCTGATGCAAGAAAAGAAAGCATGTAAAGATGTCACTTGTGAACAGGATTGTTCTGGCAACACAACAGGGAATCCTGTTGATAAAATAATAAACCAGTTGAAACTGCTGATGGATCCTTTTGTTCATGTTCACAAAGGCAGCATTCTTCAAAAACATCTTCCTGGGTTGAGAGATTGTGTGCTGACGTTGAAGCCTGATAGTTTGCAAAATGGAATTCTAGAGAGCATTGAATGTTCTCAGAACACACTGAACTTTGAACACAAGTTAGCTTTGGTATCTATCCATCCATCCCTTTTCCTCTGCTGCTCCTTGTCAGAGAAAGAAGAATCTGTTGTTGACAAGGATCTGTTGGAAAAGCATAGATTGAATCCTTATGTAGGTGTCAAGACCAGATTTTTGGTAGAGTTTATCAGGCTGTGTGAGGCAGTGAATGAGAAAGTCCTTGTTTTTAGCCAATTTATTGATCCTTTGCGTTTAATTATAGACCAACTCAAGTCAGTTTTTAATTGGTATGAGGGGAAGGAAGTGTTTTGTATGTATGGCAAAGTTGATCAAAAACAAAAGCAGTCCCTAATTCATCGCTTCAATGATGCAAATAGCCAAGTGAAGATATTGCTTGCATCAACAAAAGCATGTTCTGAGGGAATTAGCTTAGTTGGAGCTTCAAGGGTTGTGCTGTTGGATGTTGTGTGGAATCCCTCAGTGGAAAGGCAAGCTATTAGCAGAGCATATAGACTTGGCCAAAAGAGAGTTGTCTACACTTATCATCTTCTCACACAGGGAACCACTGAGTGTACAAAGTATTGTAAACAGGCAGAAAAGGACCGGTTATCTGAACTGGTTTTCTCTGCTAGAAATGCTGAAAATGATAAGCCAGAGAGTTGTGCAGGAAATTTTGAGGATAAAGTTCTTGATCAGATGGTCAGACATGACAAACTCAAAGACATGTTTGGTGAATGTTTGGTACAGCCAAAGGAAAGAAACTTGTTTGAGAGTTTTGGCTCTTGA | 3501 | 0.405 | MIEIDDNDDDDSGSQERLVHSEKKGFQAVVDVKEEEKSEGIESYVFSEKGEKFGNDEGLEHSQEKGFQGFVDDKEGEKSEEDRGSYAFADKGENFGNDNCGWGPANPITIDSDRGCDSEEERGSAGDDIWSSSTGSEDVETSDEDFLIDEDEYEILSSEESPSSSDDEKEKEWRRYSKERVRKVETESSGICRRSGERKYKQVEEEEVELENTPSSVNNDECGVQDQEEWKDVDYDTETSSELMMKGSSQLSQEEDNKAAKKHEGKRVERRVKNVSDDVEGFGDYQKSLGCSRPSEDEAQKEKKKQANDSVNLDGYKGKGHHEKGTSVRKVSSLLRNQEKIGDSAKHKTMENKEREHKDGIYSSNREKKAWVGNEAGYRNELRKEQRLIELLAECFSGMYNSVKGDSYGLEEKNDDVYQLETQPPACGETQPLKWKELREVEPPLERTESEKELDMLWKEMNEALEYEEIASRVGNIGINEEIQNTGSSTFICKHEFYLDEQIGVYCKFCYYIATEIKYVSPPVVDRFPLEGLGKTVSSGGDKVSLFEINNSGSDSEATFIHNEGTVWDLIPNIKETLYPHQQEGFEFIWTNLRGAIDLHKVRRADPCSVGGCIISHAPGTGKTRLTMVFLQAYLEVFPKCRPVIIAPASLLLTWEDEFKKWDIGIPFHNLNNLELSGKEHINATNKVDWSRNPQLNKNAVRMVKLYSWYQEKSILGISYHMYEKLAGKNGKGKIKKKHASAKVENTESGMMGKALRDAPGLLVLDEGHTPRNQRSLIFKVLSEIQTQKRIILSGTPFQNNFLELYNTLCLAVPSFPDTIPHELKKFCQSRLMQEKKACKDVTCEQDCSGNTTGNPVDKIINQLKLLMDPFVHVHKGSILQKHLPGLRDCVLTLKPDSLQNGILESIECSQNTLNFEHKLALVSIHPSLFLCCSLSEKEESVVDKDLLEKHRLNPYVGVKTRFLVEFIRLCEAVNEKVLVFSQFIDPLRLIIDQLKSVFNWYEGKEVFCMYGKVDQKQKQSLIHRFNDANSQVKILLASTKACSEGISLVGASRVVLLDVVWNPSVERQAISRAYRLGQKRVVYTYHLLTQGTTECTKYCKQAEKDRLSELVFSARNAENDKPESCAGNFEDKVLDQMVRHDKLKDMFGECLVQPKERNLFESFGS. | 1167 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Seca2g02491 | 1166 | MobiDBLite | consensus disorder prediction | 224 | 239 | - | - | |
| Seca2g02491 | 1166 | MobiDBLite | consensus disorder prediction | 138 | 157 | - | - | |
| Seca2g02491 | 1166 | Gene3D | - | 887 | 1156 | IPR027417 | - | |
| Seca2g02491 | 1166 | MobiDBLite | consensus disorder prediction | 193 | 359 | - | - | |
| Seca2g02491 | 1166 | SMART | helicmild6 | 993 | 1078 | IPR001650 | - | |
| Seca2g02491 | 1166 | MobiDBLite | consensus disorder prediction | 1 | 180 | - | - | |
| Seca2g02491 | 1166 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 568 | 829 | IPR027417 | - | |
| Seca2g02491 | 1166 | MobiDBLite | consensus disorder prediction | 340 | 359 | - | - | |
| Seca2g02491 | 1166 | MobiDBLite | consensus disorder prediction | 13 | 88 | - | - | |
| Seca2g02491 | 1166 | CDD | SF2_C_SNF | 947 | 1089 | - | - |
Showing 1 to 10 of 23 entries
Duplication type information
Functional genes information
Transcription factors information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Seca2g02491 | K10875 | - | gmx:100812737 | 1117.83 |
Showing 1 to 1 of 1 entries