Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g02490 ATGGAGTTAAACAGAGTCCCAACAAAAAGGAAGGTGACTACAAGGAAGGTGTCACTAAAACTGATTGAGAAGGAGCTTTCCATACTTCGTGGTATCCCTACATGCTCAGTCATATCTGGTCCAGGTGATACTGAGCCTAAAATATGGCCATCCCCTGAAGTGGCTAAACAACTACTACGGAGGCTTGAGGAAGTTCCAAAGGGTGTTAAGTCCAGAAAAATGGTAACTCAATTATCTTTTATGCGTGATAAGACAAAAAAAAAGTTAGAAAATCAACTTTCCAGGCTCAAGGAGAGGAACAATGAGAAAGATATGTCAATTTTAATGCATCAAATCCATCATGATGGTAAGTCTTTATCTGATTTTGAGCCTAGTGATTTGAAGTGTTTACTTGGTTATGTGGAGCAAAAACTGAATAAAGTTAGAATGATAACCAAGCATTTTAAGCAGGTGTTGCCTCCTAATCCTCCTTCACCATCACCAGTGTCTTGTCCTCAAGAGAATGAGGTCCTAGAGAAACAATCATCCTTAGATTTGGTGAAAGAGACTGATCAGGGGTGTTTCCTCCAAGCAATTTTGGAGATCTCATTGGTGAAAGTGACCTATGGTCAGAGGCGTTCTCTCTTAGTGATTTTGGAGGCCACATTGGTGTTGCCTCCTCAAGGCAATTTTGAAGGTCTCAATGGTGAAAATGACTTGTGGTTGTTACCTCAAGGCAATTTTGGAGGTCTCAATGGTGAAAGTGATGAAGGTGAAGGTCTCAATGTTGGAAGTGACTCAGGGGTGTTACCTCAAGGCAATTTTGGAGGTCTCAATGGTGAAAGTGATGAAGGCAATTATGAAGGTCTCAATGTTGGAAGTGACTCAGGGGTGTTACCTCAAGGCAATTTTGGAGGTCTCAATGGTGAAAGTGATTTAGGAATGTTGCTTGAAGACAATTTTGAAGGTCTCAATGGTGAAAGGGGTGATAGTTCACAAGTGTTGCCTAAAGGCAATTTTGGAGGTCTCAATGATGGAAGTGATCTCTTAGAGATGTACAATTTTGAAGGTCTCAATGGTGAAAGTGGTGATAGTTCACAGGTGTTGCCTGAAGGCAATTTTGGAGATCTCAGTGATGGAAGTGATCTCTTAAAGATGTACCTTGAAGATAGTTTTGAAGGTCTCAATGGTGAAAGTGATTCAAGGATTCTGAATGGAAGCTCTACTGATGAAATTGGAGCAAGTAACATATGGCCATCTTATGGACATTTTGAAAGTACAATTGGTGGAAGTTACATGGAAATAGAGCAGCATAATGAAAATCAAGGATGGTCCATTAACAACATAGGGCTAATTTGTGGTCATCAAAACAACTCTGGAGCCAACACTAATGAAGCTGCTATGGGGAGATTCGATACAAACTTTGTTGGCAATTACAATGGAAATAACTTGAATTCTGGATTGCCTACTCATAGAAATTTTGTTAGTAGCGGTGAATTTGGAAGTGATACTCAAGTGCCTACATCATTTGGAGGAAATTTTCCTTGA 1527 0.4008 MELNRVPTKRKVTTRKVSLKLIEKELSILRGIPTCSVISGPGDTEPKIWPSPEVAKQLLRRLEEVPKGVKSRKMVTQLSFMRDKTKKKLENQLSRLKERNNEKDMSILMHQIHHDGKSLSDFEPSDLKCLLGYVEQKLNKVRMITKHFKQVLPPNPPSPSPVSCPQENEVLEKQSSLDLVKETDQGCFLQAILEISLVKVTYGQRRSLLVILEATLVLPPQGNFEGLNGENDLWLLPQGNFGGLNGESDEGEGLNVGSDSGVLPQGNFGGLNGESDEGNYEGLNVGSDSGVLPQGNFGGLNGESDLGMLLEDNFEGLNGERGDSSQVLPKGNFGGLNDGSDLLEMYNFEGLNGESGDSSQVLPEGNFGDLSDGSDLLKMYLEDSFEGLNGESDSRILNGSSTDEIGASNIWPSYGHFESTIGGSYMEIEQHNENQGWSINNIGLICGHQNNSGANTNEAAMGRFDTNFVGNYNGNNLNSGLPTHRNFVSSGEFGSDTQVPTSFGGNFP. 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g02490 508 Coils Coil 82 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g02490 Seca-Chr2 64913188 64915018 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g02490 24 171 MADS-box Gene Family AT5G26630 28.667 4.52e-12 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g02490 - - gmx:106798339 163.696