Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g02477 ATGTCCTTCAATCAATCAAAGTCCGATAAGAGCGACGCTGTGTACCGAAAATCCGGGCGATCCGCCAGCTTCAATCAGCAGCGAGGTTCATCCGGCGGTGCCTACGTCAAGGGCGGCGGCGCGGCCGTGCCTTCACCGTCACTCTCCTCTAGTCGGAGTTTTAACAAGAAGTCTAATAATAATGCACAAGGTGGGCAATCTAGGGTAAACCCTCCCCCGGTGAATTCAGCTGAGTCTAATAGTGCTCATGCAGCCCGGACCATACCAAATGGTTCCCATGTACAGCCGCACCATCATGGAGGATCTGATGCACCAGTTACAAATGCAACTGTCAAGTCATCTGAATCATCAGCTGCACAGAGGAGCCCCAGAGTTGTTCCAAAAGCTCCTACTTCTCAACCTCCCGCCATGAATTCTGAGCCAGCAGCTCCTACCACCCCTGCTAAGGGAGATGCATCTAAGGCATTCCCTTTTCAATTCGGATCTATTAGTCCCGGCTTTATGAATGTGATGGCAATTCCTGCTCGCACAAGCTCCGCTCCTCCTAATATAGATGAGCAGAAGCGTGATCAGGCTCGTCATGATTCTTTTAGACCTGTGCCTTCAGTGCCAGCACCTCCTGTTCCAAAGCATCAGCCAGCGAAAAAGGATACAGGTGTCTCTGATCTATCTAACGCTGGTGAAACTTATACAGGGACTAGGACAAAAAAGGATACTCAAGTTTCACCTTTACCCCCAGCAAGCCACATGCAGAAGCCTTCTGTTATTCCTATAACTGGAATTTCTATGGCTATGCCATTTCACCAGTCACAGGCATCTGTACACTTTGGTGGTCCCAATCCACAGATTCAGTCTCAGGGTATGTCAACAGCATCTCTTCAGATGCCTTTACCAATGCCTTTACCAATTGGAAGTGCTGCACAAGTACAACAGGTTTTTGTTCCAAGTCTTCAACCTCATCCAATCCATCCTCAAGGAATTATGCATCAAGGCCAAAGCATTGGTTTCACTCCTCAAATGGGTCCTCAATTGCCCCATCAGTTAGGCAACATGGGTATTGGCATCAGCCCACAATATACCCCACAGCAAGGAGGAAAATTTGCTGGCCCTCGTAAAACTACTACTGTTAAAATAACTCATCCTGAGACACATGAAGAGCTTAGGCTTGATAAAAGGGCTGATACATATTCAGATGGTGGGTCATCTGGTGCTCGGTCTCATTCTGGCATGCCTTCTCAATCTCAGCCTGTCCAGCCATTTGCAGCTTCTCATCCTATTAGTTACTATCCATCCAGTTCCTACAGTACAAGTTCTCTCTTTTATCCACCTCCTAGCTCTCTTCCATTATCAAGTAGCCAGATAACTCCTAACTCTCAGCCTCCAAGAATTAATTATGCAGGGAGCCATGGTCTGCAAAATGTTGGTTTTATGAACACACAATCTCATACTCATAGTTCCCTGCCTGTTAATAAAGCTGGTACTCTTATTCCTAGCAATGTTGAACCACCTAATCCAGAATTTTCCCGTGATGTGCAAAATGCAATCTCATTACCTCCATCAGGAGTAAATTCTGTGTCTATTAAGCCAAGTGATGTGTCTGTTGTTGTGGACTCGAGCATTTCTGGTGTTCAAAAGAGTGGATCTCCTAGTTCTTCAGTAACATCTGGTGATGTTAGCTCTTCTGTGCCACCAAAAGGGTCTGAAACCTGTTCTGAAATTTCTTCACAACAATCTATTGCTGCATCTGCTGTCACTGAGGATTCTGTTTCAGTTGTGTCTAATAATGAAGGAAGAAAGAAAGAATCACTTAGTAGGTCAAATTCTTTGAAGGATAATCAGAAGAAACTACCAAAGAAAGACCAATCTCAGCAACAGGTTACTGTACAATCTGCTGCTTTGGCTGAAGAACCTTCCCAAGTTGTTGATGGTGGTATCTCTGATAGAGGAGCTTCTGAAACCATAGGAACTAGAACAAACCATTCTGAAGCAATAGCCAGTAAAGATCTCTCAGCAGCAGCTTCAGATACAACTGCCAGTGAGGGCATACCTTATGCTGTTGAAGTGAAGACAAATGATTCTAGTGAGATTTCTGCTTGTGCTTCAGCTGAAGGACCTGTTACTCAAGCCGTGGATAGTTTGAACAATCATAAAAATGATGAACTGGATGGATTATCACAACAGGATAAACTGTTAAAGCAGAACATTTTGGATATAGGTGGTAAAAATGAAAATTCATCTCTTCAGAGATGTGAAAATATCACCCATGGTGAAATGGAATTTAAACAACCTAAACAAGGTGCTGCAAAGTTAAGCACTGAGGTTGTAACCTTGAGGACTGGACAGGAAGGGCAGGATGAATCTACAAGTTGTCTTGCAGAATGTGACAGGATGGCGGATAATTTAGGCTTGTCTACCTCTACTGCATTGGATTCTAAAGATGTTTCTTTGAACAAAAATGATAGTGTTGTTGCTAACGAAGCTATTGCTACAAATTCTGGCATATCAGATCAGCAATCTGCTGATCTTCTAGAAACAACTTCAAAAAATTGCAAGGATAGTTCAGAGAATGCTGACAGTGATTTACTGTCTCTTCCAGCAGCATCAGGTACCAATGACAGACCAATTTTAGAGCCAAGTAAGGTGAAAACTACAACAAAGGGGAAAAAGAAAAGAAAAGAGATTCTTCAGAAAGCAGATGCTGCTGGGTCGACATCTGATCTTTATAATGCATATAAGGGACCTGAGGAAAAGAAAGAAGCTGTTGTAAGTTCAGAGAAAACTGAAAGTGTTTCCACTCCCGGAAATTTGGAGCAGTTGCCTATGGATGCCGCTCAGCCAGATGATATTACAAGTGAGCAGAGTAAAGCTGAACTTGATGACTGGGAGGATGCTGCTGACATGTCTACACCAAAACTAGAAGTTCCAGATAAAAATGAACATGTTACTGATGGGAGTGCAGTTACTGCCAAAAAGTACTCTCGAGATTTCCTTTTGAAGTTTGCAGAGCAATGCACTGATCTTCCGGAAGGGTTTGAAATCAAAAAAGACATAGCTGAGGCTTTGATGAGTGCTAATATCAGTTCTCATGTTTCTGAACGAGATTCACATCCTTCTCCTGGAAGGGTTATAGATAGGTCAGGTCGGATGGATCGTCATGGGAGTGGTGTTATTGAGGAAGACAAATGGAGTAAAGTTTCTGGTGCTTTTCATTCTGGTATGCGTTTGGATGGTATTGGAGGTAATGCGGGATTTCGACCTGGCCAAGGAGGCAATTTTGGTGTTCCAAGGTATCCACGCACACAAACCCCTCTGCAATATGCTGAAGGGATTCTTTCTGGGCCAATGCAATCCATGGTAAATCAGGGAGGAATGCAAAGAAACAGCCCTGATAGTGAAAGGTGGCAGCGTGCTGCTAGCTTCCAGCAGCGGGGTTTAATTCCTTCTCCATCTCCTCAATCTCCTTTACAGATGATGCACAAAGCTGAGAAAAAGTATGAGGTGGGTAAAGTGACAGATGAGGAAGAGGCGAAGCAGAGGCAGCTGAAAGGTATATTGAACAAGTTAACTCCTCAGAATTTCGAGAAGCTTTTTGAGCAGGTAAAAGCAGTTAATATTGACAATGCAGTCACTCTCACTGGTGTCATCTCACAAATCTTTGAGAAGGCCTTGATGGAGCCTACCTTCTGTGAAATGTATGCCAATTTCTGTGCACATCTGGCAGCTGCGTTGCCTGATCTCAGTCAAGATAATGAAAAGATAACTTTTAAGAGATTATTATTGAACAAGTGCCAGGAAGAATTTGAGAGGGGTGAAAGAGAGCAAGAAGAAGCTAACAAGGCCGATGAAGGTGAGGTGAAACAGTCTGTTGAGGAAAGAGAAGAGAAACGAACCAAGGCTAGAAGGCGCATGTTGGGTAATATCAGATTGATTGGAGAACTATATAAAAAGAAAATGTTGACAGAGAGGATAATGCATGAGTGCATCAAGAAGTTACTTGGTCAGTATCAGGATCCTGATGAAGAGGATATTGAAGCCTTGTGCAAGCTGATGAGTACTATTGGAGAGATGATTGACCATCCTAAAGCCAAGGAACATATGGATGCATACTTTGAAAGGATGAAATTATTATCAAACAACATGAATTTATCTTCTAGGGTTAGGTTCATGTTGAAGGATGTCATTGATTTGAGAAAGAATAAATGGCAACAAAGGAGAAAAGTTGAAGGTCCAAAGAAAATTGAAGAGGTGCACAGAGATGCTTCCCAAGAGAGGCAGGCCCAAGCTAGTAGGCTGGGTCGTGGTCCAGGCAACAATGCAGCAAGGAGGATGCCTATGGAATTTGGTCCGAGAGGGTCATCTATGTTATCTCCTAATGCTCAGATGGGTGGAGTGCGTGGGTTGCCTACTCACGTTCGTGGGTTTGGTTCTCAGGATGTTCGTATGGATGAAAGGCAATCTTATGAGGCTAGGACATTGTCAGTTCCCTTGCCTCAAAGACCTTTAGGTGATGATTCAATAACATTGGGACCCCAGGGTGGTCTTGCTAGAGGAATGTCCATTAGAGGTCCACCTGCGGTTTCAAGTTTGACTGGTATTAATGGTTATAGTAATTTAGTGGAGCGTGCTCCCTACAGTTCAAGGGAAGACCTCACACCAAGATATGTTCCAGATAGATTTTCTGGTCCAACTGCTTATGATCAATCCAGTTTTCAAGACCGTAATATGAATTATGGTCACAGGGACTTGAGAAATGCAGATAGAATTCCTGATAGAGCTGTTATAACCTCACCTCCTGCCCGAGTGCAAGGAACAGCAGGCTCCCAGAGCACTTCTTCAGAGATGGGTTGGTCAGAGGAGAGACTGCAGGACATGTCCATGGCAGCAATCAGAGAATACTATAGTGCTAGAGATGTGAATGAAGTTGTTTTATGTGTCAAAGATCTGAACTCACCAAGCTTTCATCCTTCCATGGTTTCTCTCTGGGTCACGGACTCATTCGAGAGAAAGGACACAGAGAGAGATCTTTTGGCCCAACTGCTAGTCAACCTTGTGAAATCTAATGATGGCACCTTAAATCAAGCCCAGCTCATCAAAGGGTTTGAATCTGTTCTCAGTACTTTGGAAGATGCGGTTAATGATGCCCCGAAAGCACCAGAGTTTCTTGGCCGCATTTTTGCCAAAACTATAACAGAGCATGTAGTCTCTTTGAAAGAGATCGGGCAGTTAATTCGTGATGGTGGGGAGGAACCAGGCAGTCTTTTAAACATTGGACTTGCAGCTGATGTTATTGGAAGCACCTTAGAAGTAATAAAAATCGAGAAGGGTGATGCTGTCTTGAATGAGATCCGGACAAGCTCCAACTTGCGGTTGGAGACCTTCCGGCCACCAGAACCGCTTACATCACGGAAGTTAGAGAAATTCATTTAG 5427 0.4376 MSFNQSKSDKSDAVYRKSGRSASFNQQRGSSGGAYVKGGGAAVPSPSLSSSRSFNKKSNNNAQGGQSRVNPPPVNSAESNSAHAARTIPNGSHVQPHHHGGSDAPVTNATVKSSESSAAQRSPRVVPKAPTSQPPAMNSEPAAPTTPAKGDASKAFPFQFGSISPGFMNVMAIPARTSSAPPNIDEQKRDQARHDSFRPVPSVPAPPVPKHQPAKKDTGVSDLSNAGETYTGTRTKKDTQVSPLPPASHMQKPSVIPITGISMAMPFHQSQASVHFGGPNPQIQSQGMSTASLQMPLPMPLPIGSAAQVQQVFVPSLQPHPIHPQGIMHQGQSIGFTPQMGPQLPHQLGNMGIGISPQYTPQQGGKFAGPRKTTTVKITHPETHEELRLDKRADTYSDGGSSGARSHSGMPSQSQPVQPFAASHPISYYPSSSYSTSSLFYPPPSSLPLSSSQITPNSQPPRINYAGSHGLQNVGFMNTQSHTHSSLPVNKAGTLIPSNVEPPNPEFSRDVQNAISLPPSGVNSVSIKPSDVSVVVDSSISGVQKSGSPSSSVTSGDVSSSVPPKGSETCSEISSQQSIAASAVTEDSVSVVSNNEGRKKESLSRSNSLKDNQKKLPKKDQSQQQVTVQSAALAEEPSQVVDGGISDRGASETIGTRTNHSEAIASKDLSAAASDTTASEGIPYAVEVKTNDSSEISACASAEGPVTQAVDSLNNHKNDELDGLSQQDKLLKQNILDIGGKNENSSLQRCENITHGEMEFKQPKQGAAKLSTEVVTLRTGQEGQDESTSCLAECDRMADNLGLSTSTALDSKDVSLNKNDSVVANEAIATNSGISDQQSADLLETTSKNCKDSSENADSDLLSLPAASGTNDRPILEPSKVKTTTKGKKKRKEILQKADAAGSTSDLYNAYKGPEEKKEAVVSSEKTESVSTPGNLEQLPMDAAQPDDITSEQSKAELDDWEDAADMSTPKLEVPDKNEHVTDGSAVTAKKYSRDFLLKFAEQCTDLPEGFEIKKDIAEALMSANISSHVSERDSHPSPGRVIDRSGRMDRHGSGVIEEDKWSKVSGAFHSGMRLDGIGGNAGFRPGQGGNFGVPRYPRTQTPLQYAEGILSGPMQSMVNQGGMQRNSPDSERWQRAASFQQRGLIPSPSPQSPLQMMHKAEKKYEVGKVTDEEEAKQRQLKGILNKLTPQNFEKLFEQVKAVNIDNAVTLTGVISQIFEKALMEPTFCEMYANFCAHLAAALPDLSQDNEKITFKRLLLNKCQEEFERGEREQEEANKADEGEVKQSVEEREEKRTKARRRMLGNIRLIGELYKKKMLTERIMHECIKKLLGQYQDPDEEDIEALCKLMSTIGEMIDHPKAKEHMDAYFERMKLLSNNMNLSSRVRFMLKDVIDLRKNKWQQRRKVEGPKKIEEVHRDASQERQAQASRLGRGPGNNAARRMPMEFGPRGSSMLSPNAQMGGVRGLPTHVRGFGSQDVRMDERQSYEARTLSVPLPQRPLGDDSITLGPQGGLARGMSIRGPPAVSSLTGINGYSNLVERAPYSSREDLTPRYVPDRFSGPTAYDQSSFQDRNMNYGHRDLRNADRIPDRAVITSPPARVQGTAGSQSTSSEMGWSEERLQDMSMAAIREYYSARDVNEVVLCVKDLNSPSFHPSMVSLWVTDSFERKDTERDLLAQLLVNLVKSNDGTLNQAQLIKGFESVLSTLEDAVNDAPKAPEFLGRIFAKTITEHVVSLKEIGQLIRDGGEEPGSLLNIGLAADVIGSTLEVIKIEKGDAVLNEIRTSSNLRLETFRPPEPLTSRKLEKFI. 1809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g02477 1808 FunFam Eukaryotic translation initiation factor 4G 1614 1807 - -
Seca2g02477 1808 MobiDBLite consensus disorder prediction 1028 1053 - -
Seca2g02477 1808 MobiDBLite consensus disorder prediction 1269 1297 - -
Seca2g02477 1808 SMART if4_15 1178 1400 IPR003890 GO:0003723|GO:0005515
Seca2g02477 1808 MobiDBLite consensus disorder prediction 1034 1053 - -
Seca2g02477 1808 MobiDBLite consensus disorder prediction 1549 1573 - -
Seca2g02477 1808 SUPERFAMILY ARM repeat 1615 1805 IPR016024 -
Seca2g02477 1808 MobiDBLite consensus disorder prediction 619 634 - -
Seca2g02477 1808 MobiDBLite consensus disorder prediction 106 121 - -
Seca2g02477 1808 MobiDBLite consensus disorder prediction 445 515 - -
Seca2g02477 1808 MobiDBLite consensus disorder prediction 1405 1424 - -
Seca2g02477 1808 MobiDBLite consensus disorder prediction 177 252 - -
Seca2g02477 1808 Coils Coil 1260 1280 - -
Seca2g02477 1808 MobiDBLite consensus disorder prediction 541 597 - -
Seca2g02477 1808 ProSiteProfiles MI domain profile. 1620 1744 IPR003891 -
Seca2g02477 1808 MobiDBLite consensus disorder prediction 598 618 - -
Seca2g02477 1808 MobiDBLite consensus disorder prediction 380 419 - -
Seca2g02477 1808 Pfam MIF4G domain 1178 1400 IPR003890 GO:0003723|GO:0005515
Seca2g02477 1808 MobiDBLite consensus disorder prediction 541 662 - -
Seca2g02477 1808 MobiDBLite consensus disorder prediction 18 32 - -
Seca2g02477 1808 MobiDBLite consensus disorder prediction 218 247 - -
Seca2g02477 1808 FunFam Eukaryotic translation initiation factor 4G 1178 1413 - -
Seca2g02477 1808 Gene3D - 1613 1808 - -
Seca2g02477 1808 Gene3D - 1178 1413 - -
Seca2g02477 1808 MobiDBLite consensus disorder prediction 445 493 - -
Seca2g02477 1808 MobiDBLite consensus disorder prediction 849 866 - -
Seca2g02477 1808 MobiDBLite consensus disorder prediction 1 159 - -
Seca2g02477 1808 MobiDBLite consensus disorder prediction 44 88 - -
Seca2g02477 1808 MobiDBLite consensus disorder prediction 1405 1442 - -
Seca2g02477 1808 MobiDBLite consensus disorder prediction 399 419 - -
Seca2g02477 1808 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 783 1808 IPR045208 GO:0003743
Seca2g02477 1808 Pfam MA3 domain 1627 1733 IPR003891 -
Seca2g02477 1808 SUPERFAMILY ARM repeat 1172 1402 IPR016024 -
Seca2g02477 1808 SMART ma3_7 1621 1735 IPR003891 -
Seca2g02477 1808 MobiDBLite consensus disorder prediction 849 955 - -
Seca2g02477 1808 MobiDBLite consensus disorder prediction 380 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g02477 Seca-Chr2 64296395 64305746 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g02477 1 1807 Eukaryotic Initiation Factors Gene Family AT3G60240 46.085 0.0 1312
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g02477 K03260 - gmx:100796636 2674.81