Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g02430 ATGCAAAATCATTCTTCTTTGCAAAATTTTGCTGGGCCTGGTAAGGTCAAAAGAAAAAGGAAAAGGCTTTCAGCTCCTAGAACAAGAGACACTTTAAGCACTTGGTCACACCATATATTAAGTTCACAGAGTGATGGCTTCAGTTCACACTCTCCTCTGCTGAAACAGGCTTATTGGTTAGTTGATAGTAAACTCATTCTCCCTAAAAAGAATGATGAGCAAGAAGGGGTAGCCAAAAGTGGGGAAGTGGAGAAGGAGAACTTGGGGGATTCCGAGCTTGAAATTAACAACAATGAGCAACATCCAATTCCAAGGAGGTGCACCCATTGTTTGTCTCAGAGGACCGCACAATGGAGAGCTGGACCATTGGGTCCAAAGACACCTATGCAATGCATGTGGGGTGAGGTACAAGCCTAA 417 0.4388 MQNHSSLQNFAGPGKVKRKRKRLSAPRTRDTLSTWSHHILSSQSDGFSSHSPLLKQAYWLVDSKLILPKKNDEQEGVAKSGEVEKENLGDSELEINNNEQHPIPRRCTHCLSQRTAQWRAGPLGPKTPMQCMWGEVQA. 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g02430 138 MobiDBLite consensus disorder prediction 71 92 - -
Seca2g02430 138 MobiDBLite consensus disorder prediction 71 103 - -
Seca2g02430 138 MobiDBLite consensus disorder prediction 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g02430 Seca-Chr2 62432750 62433166 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g02430 9 127 C2C2-Gata Transcription Factor Family AT4G32890 32.773 2.92e-08 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g02430 - - pvu:PHAVU_004G079200g 159.844