Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g02422 ATGTTATTTCTTGGTGCATGCACCAAGCCTCCATGCTTGTCAATGGTAACTGAATATATGGAAATGGCATCTTTGTTTTACTTGATTCATGTTAGCGGTCAAAAGAAGAAGCTTAGTTGGCGAAGAAAACTAAGGATGTTGGTGACGTGTGCAGGTAAGTATTCTGGTTATTCATACCTTCAGAACATGTTAAAGGGTTGGTTTGAAATTGGTTTTGAATAG 222 0.3784 MLFLGACTKPPCLSMVTEYMEMASLFYLIHVSGQKKKLSWRRKLRMLVTCAGKYSGYSYLQNMLKGWFEIGFE. 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g02422 73 Gene3D Transferase(Phosphotransferase) domain 1 1 67 - -
Seca2g02422 73 SUPERFAMILY Protein kinase-like (PK-like) 3 49 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g02422 Seca-Chr2 62263878 62264099 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g02422 1 47 MAP Kinase Kinase Kinase AT3G58640 78.723 1.72e-23 90.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-1 Seca2g02422 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g02422 - - gmx:100807193 89.7373