Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g02421 ATGGTTACAATTTCTCTCAAATACCAGATTGATAAGGTAGTTTCAGACCAAGAGGCAGTTTTTAATGATTTATCAGCTTGTACGACAATGGGGTTGGTAACTGTCATCTGCATTGATGTATCAGGTGGGCTTATCTCTAAACCAATGGAGGTTAGTAGAATCTGGATGGGGGAGACAGATATTAGCAAAGTTGAGGGATCAAAATCAGATCTGGGTGTACTTATGCTTAAAGGGTTGAAAGAAGTCAAAGAATAG 255 0.3882 MVTISLKYQIDKVVSDQEAVFNDLSACTTMGLVTVICIDVSGGLISKPMEVSRIWMGETDISKVEGSKSDLGVLMLKGLKEVKE. 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g02421 84 Gene3D - 34 46 IPR023214 -
Seca2g02421 84 Gene3D - 47 66 IPR023299 GO:0000166
Seca2g02421 84 Gene3D - 2 33 - -
Seca2g02421 84 PANTHER CATION TRANSPORTING ATPASE 1 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g02421 Seca-Chr2 62261318 62261572 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g02421 2 63 Primary Pumps ATPases AT3G63380 43.548 2.13e-11 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g02421 K01537 - gmx:102661547 103.219