Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g02414 ATGACACAAAATGGGCAGCCTTTTATGGATTTTGTTGTAGTGGGTTTGGACAAGGGAAATGAAGCAGAACATCGCTGTCTAGAAGAGAGTACAAGTATAGTTGATGGAGTTGAAGTTCAAGAACCATATGTTGGTATGGAATTTGATTCTGAAGAAGCTGCTCGGAAATTTTATGTTGAATATGCCAGACGGGTAGGATTTGTTGTACGCATTATGCAACGTCGGCGTTCTGGAATTGATGGAAGGACTCTTGCTCGCCGACTTGGATGTAACAAACAAGGATTCTCACCAAATAACAAGGGAGCATTGGGGCCAGAGAAAAAGCCAAGACCTAGTGCCCGAGAAGGTTGCAAGGCAACAATTTTGGTGAAGTTGGAAAAATCAGGAAAATGGGTTGTCACAAGATTTATAAAGGATCACAACCATCCTCTAATTGCTACAGCTAATGGATTCAGCACAGCGGGTGATAAAGATAAGAAAATTGCGGAACTTACTATGGAGATAGAGCGCCAAGATAAACTGTGTGCTGCTTATCGAGAAAAACTACTCTGCTTCATAAACAATGTTGAAGAGCAAACAGAGGAACTGTCCACAAAAATTCAACACATTATTGAAACTATAAAGAGAGCTGAGTCAGACATGAAAAAATGTTCCCAGAACAGAGCCTCGGTGCTTAACCTGAGTGTATAA 690 0.4101 MTQNGQPFMDFVVVGLDKGNEAEHRCLEESTSIVDGVEVQEPYVGMEFDSEEAARKFYVEYARRVGFVVRIMQRRRSGIDGRTLARRLGCNKQGFSPNNKGALGPEKKPRPSAREGCKATILVKLEKSGKWVVTRFIKDHNHPLIATANGFSTAGDKDKKIAELTMEIERQDKLCAAYREKLLCFINNVEEQTEELSTKIQHIIETIKRAESDMKKCSQNRASVLNLSV. 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g02414 229 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 21 210 - -
Seca2g02414 229 Coils Coil 161 181 - -
Seca2g02414 229 MobiDBLite consensus disorder prediction 92 114 - -
Seca2g02414 229 Coils Coil 186 220 - -
Seca2g02414 229 Pfam FAR1 DNA-binding domain 56 145 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g02414 Seca-Chr2 61575576 61581282 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca2g02414 FAR1 5.4e-29 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g02414 - - vun:114183030 380.178