Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g02331 ATGGTCCCTATAAAAACCTCTCCAAACAACATAAAACAACTGAAAACGTGTCCCGGGTTAACCAACCCCCTTCGGGTTCGGGTTCGGGTTCTCTCGTGGTACCGGGTCATCTCCACCATGTACGGCAGCTGCAGCGACAGCGACAATGACAATCAACTCCATGGCCATGACAATGATGACACGTTGGACTTCCGAAACCTTAAGGTTGTCTCTGCCGTGGGACGCGGCGCGAAGGGCGTCGTGTTCCTCGCGAGAACCTACAACGCGTCAAACGGGGAATGGCTTGCCTTGAAAGCCATTTCCAAAGCCTTGCTTCTGAAGAAAAACAAGAACCGCAATAGCGAATGCAAGAGGGTCTCGTTTGAACAACAAATACTACGTCGTTTCGATCACCCATTATTACCGCGATTACGAGGGGTTTTTGAGACCCAACAACTCAAAGGATTCGCCATCGACTATTGCCATGGTGGGACTTTGCACTCTCTTCGTAAGAAGCAAACGGAGAAGACATTCTCTGAAGAAACCATAAGGTTTTACGCAGTTGAATTGATCTTGGCGTTGGAGTATTTGCATAATTTGGGAGTAGTGTATAGGGATTTGAAGCCTGAGAACATCATGATCCAACAAACAGGTCATATAATGCTTGTGGATTTCGATCTCTCCAAGAAGCTGAACCCCAAGTCACCAAACTCGCTAAGTTGTAGCTCATCCCCAGGTTCTGACTCGGAGAAAGACTTGAGGAAGCGACGATTCTCGCGGTTCTACTGTTACTGTCACTCGGGGATGCTACTGCATGACTCAGAGAGTCAGCTCGACACCAACTCAGCGCGTCGAAGCGAATCGGACTCTGTGGAAAAGTCCAACTCGTTCGTAGGAACAGAGGATTACGTAGCACCAGAAGTTGTATCTGGTGAAGGACACAACTTTGGGGTAGATTGGTGGTCATTCGGCGTCGTTTTATATGAGATGCTTTACGGGATGACACCATTTAAGGGCACAAATAGGAGAGAAACGTTTCACCGGATTTTAACGAAGGAGCCTGATCTGACTGGTGAAACGATGCCGTTAAGGGACTTGATTGGGAGATTACTTGAGAAAGAACCTAACCGTAGGATCGAGGTGGATGAAATCAAGGGCCATGATTTCTTTAAAGGTGTGAAGTGGGATACGGTCTTGGAGATTGCACGTCCACCATATATTCCACAGAGTGAGGTTGAGGACACAAAGGGCTTTTCAAGAAAAGATGTGGAGTCATTTGTGCATGGGATATTTTTCCCTAAGAATAATAATGGTGAAGGAGAGAAAAATAATGAGGTGGTGAAAAAGAAGGATGAAAAGAGGAAAGAGGACAATAATAATCACAATAGTAATAAGCAAGTGTGGGTTGACAAGTTGAATCAGAATCCTAATAAGGACGAAAATTTTTTAATTTTTTGA 1437 0.4551 MVPIKTSPNNIKQLKTCPGLTNPLRVRVRVLSWYRVISTMYGSCSDSDNDNQLHGHDNDDTLDFRNLKVVSAVGRGAKGVVFLARTYNASNGEWLALKAISKALLLKKNKNRNSECKRVSFEQQILRRFDHPLLPRLRGVFETQQLKGFAIDYCHGGTLHSLRKKQTEKTFSEETIRFYAVELILALEYLHNLGVVYRDLKPENIMIQQTGHIMLVDFDLSKKLNPKSPNSLSCSSSPGSDSEKDLRKRRFSRFYCYCHSGMLLHDSESQLDTNSARRSESDSVEKSNSFVGTEDYVAPEVVSGEGHNFGVDWWSFGVVLYEMLYGMTPFKGTNRRETFHRILTKEPDLTGETMPLRDLIGRLLEKEPNRRIEVDEIKGHDFFKGVKWDTVLEIARPPYIPQSEVEDTKGFSRKDVESFVHGIFFPKNNNGEGEKNNEVVKKKDEKRKEDNNNHNSNKQVWVDKLNQNPNKDENFLIF. 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g02331 478 FunFam Serine/threonine-protein kinase OXI1 158 226 - -
Seca2g02331 478 ProSitePatterns Serine/Threonine protein kinases active-site signature. 195 207 IPR008271 GO:0004672|GO:0006468
Seca2g02331 478 Gene3D Phosphorylase Kinase; domain 1 67 157 - -
Seca2g02331 478 MobiDBLite consensus disorder prediction 269 289 - -
Seca2g02331 478 Gene3D Transferase(Phosphotransferase) domain 1 158 230 - -
Seca2g02331 478 Gene3D Transferase(Phosphotransferase) domain 1 272 402 - -
Seca2g02331 478 ProSiteProfiles AGC-kinase C-terminal domain profile. 384 478 IPR000961 GO:0004674|GO:0005524|GO:0006468
Seca2g02331 478 MobiDBLite consensus disorder prediction 455 478 - -
Seca2g02331 478 SMART serkin_6 67 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca2g02331 478 PANTHER FLIPPASE KINASE 1-RELATED 56 409 - -
Seca2g02331 478 SUPERFAMILY Protein kinase-like (PK-like) 66 408 IPR011009 -
Seca2g02331 478 MobiDBLite consensus disorder prediction 434 454 - -
Seca2g02331 478 MobiDBLite consensus disorder prediction 426 478 - -
Seca2g02331 478 FunFam Serine/threonine-protein kinase OXI1 285 402 - -
Seca2g02331 478 ProSiteProfiles Protein kinase domain profile. 67 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca2g02331 478 Pfam Protein kinase domain 69 231 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca2g02331 478 Pfam Protein kinase domain 284 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g02331 Seca-Chr2 58874946 58877124 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g02331 61 478 AGC Kinase Gene Family AT3G25250 52.887 1.87e-148 429
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Seca2g02331 Pkinase 7e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g02331 K20714 - gmx:100813693 584.719