Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g02310 ATGCTGTTATATACTATCGCATTTAGTTCTTACTTAAGCATGTTTTTGCTGCTTTTATGTAGGTATGAGCTTGGTCGCCAGCCAGCAAACACCAAGTTATCAAGCAACAAGACAGTTAGGAGGATTCGTGTTAGAGGTGGCAATGTTAAATGGAGGGCATTGAGATTGGATATTGGAAATTACTCATGGGGTAGTGAAGCAGTAACTCGCAAGACTCGTATTCTAGATGTGGTTTACAATGCCTCAAACAATGAGCTTGTGCGAACTCAAACCCTGGTCAAGAGTGCTATTGTGCAGGTTGATGTCGCTCCATTCAAACTGTGGTACTTGCATCACTATGGTGTTGATATTGGTAGAAAAAAGAAAACAGCATCCAAGAAGGACTCTACAGAGGAGGGTGGTGAAGCTGCTGCTGAAGAAACTAAGAAAAGTAATCATGTTCAGAGAAAACAAGAGAAGCGCCAGAAAGATCGTAAGCTTGATCCTCACATTGAAGAGAAGTTTGGTGGTGGTCGATTTGTAGCCTGTATTTCTTCTCGCCCTGGTCAATGTGGTCGGGCTGATGGGTACATTCTGGAAGGTAAAGAACTGGAATTTTACATGAAGAAATTACAGAAGAAGAAGGGAAAGGGTTCTGCTTAA 642 0.4206 MLLYTIAFSSYLSMFLLLLCRYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDIGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDVAPFKLWYLHHYGVDIGRKKKTASKKDSTEEGGEAAAEETKKSNHVQRKQEKRQKDRKLDPHIEEKFGGGRFVACISSRPGQCGRADGYILEGKELEFYMKKLQKKKGKGSA. 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g02310 213 Pfam Ribosomal protein S8e 22 192 IPR022309 -
Seca2g02310 213 Gene3D Ribosomal protein S8e, subdomain 104 171 IPR042563 -
Seca2g02310 213 MobiDBLite consensus disorder prediction 121 165 - -
Seca2g02310 213 NCBIfam ribosomal protein eS8 21 194 IPR001047 GO:0003735|GO:0005840|GO:0006412
Seca2g02310 213 FunFam 40S ribosomal protein S8 27 156 - -
Seca2g02310 213 CDD Ribosomal_S8e_like 21 192 - -
Seca2g02310 213 FunFam 40S ribosomal protein S8 104 171 - -
Seca2g02310 213 PANTHER 40S RIBOSOMAL PROTEIN S8 21 210 IPR001047 GO:0003735|GO:0005840|GO:0006412
Seca2g02310 213 Gene3D - 23 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g02310 Seca-Chr2 57910685 57913089 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g02310 21 201 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 80.220 1.08e-102 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g02310 K02995 - pcin:129288318 326.25