Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g02277 ATGGCTGCCAATTTCTGGACATCATCTCACTACAAGCACCTTTTGGATCAAGAAGACGTGGATATGGTGAATCCACTTGACAAAGAAAAGGGTGTCACACTTGAAGATTTTAAGCTCATTAAGATGCACATGGCCAATTATATTTTGAAATTGGCTCAACAAGTAAAAGTGAGGCAGAGGGTTGTTGCCACTGCAGTTACATACATGAGGCGTGTATACACCAGGAAGAGTATGACAGAATATGATCCACGCCTGGTAGCTCCAACCTGCTTGTACCTGGCATCAAAAGCAGAAGAAAGCACAGTGCAGGCTCGGCTGCTTGTATTTTACATTAAAAAATTATATGCTGATGATAAGTATAGGTATGAAATCAAGGACATACTTGAAATGGAAATGAAGATTTTAGAAGCACTGAACTATTACCTGGTTGTATTCCACCCCTACCGTTCCCTATCTCAGTTGCTTCAGGATGCAGGTCTGAATGATCTAAGCATGACTCAACTAACTTGGGGACTTGTAAATGACACATACAAGATGGACCTAATGCTTGTACATCCTCCACATTTGATTGCTTTAGCTTGCATATACATTGCTAGTGTACTGAGGGAGAAAGACACCACTGTCTGGTTCGAAGAACTTCGTGTTGATATGAATGTGGTTAAAAATATATCAATGGAGATACTTGATTTTTATGAAAGCAATAGAATGTTCACTGATGATAGAATCAACGCTGCTCTCCAGAAGCTATAA 750 0.3987 MAANFWTSSHYKHLLDQEDVDMVNPLDKEKGVTLEDFKLIKMHMANYILKLAQQVKVRQRVVATAVTYMRRVYTRKSMTEYDPRLVAPTCLYLASKAEESTVQARLLVFYIKKLYADDKYRYEIKDILEMEMKILEALNYYLVVFHPYRSLSQLLQDAGLNDLSMTQLTWGLVNDTYKMDLMLVHPPHLIALACIYIASVLREKDTTVWFEELRVDMNVVKNISMEILDFYESNRMFTDDRINAALQKL. 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g02277 249 PIRSF Cyclin_C_H_G 1 249 - -
Seca2g02277 249 PANTHER CYCLIN 29 234 IPR043198 GO:0006357|GO:0016538
Seca2g02277 249 CDD CYCLIN_AtCycC_rpt1 35 141 - -
Seca2g02277 249 Gene3D - 7 238 - -
Seca2g02277 249 Pfam Cyclin, N-terminal domain 43 142 IPR006671 -
Seca2g02277 249 SUPERFAMILY Cyclin-like 146 237 IPR036915 -
Seca2g02277 249 SUPERFAMILY Cyclin-like 4 144 IPR036915 -
Seca2g02277 249 FunFam cyclin-C1-2-like isoform X1 19 143 - -
Seca2g02277 249 Gene3D - 19 143 - -
Seca2g02277 249 SMART cyclin_7 46 136 IPR013763 -
Seca2g02277 249 SMART cyclin_7 149 229 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g02277 Seca-Chr2 55720108 55736368 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g02277 60 199 Core Cell Cycle Gene Families AT5G27620 29.333 8.79e-11 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g02277 K15161 - gmx:100784345 465.307