Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g02267 ATGGTGTTCGAGAAAACTGAGAGGAAAACGAATGTTAATTTTGTTATAGATGATGGAACAGGACGAATCAAATGTCGAAGATGGAATGACATGTATGTTCGTGTTAATGGGCATTTGAAAACCTTTCAAGGTGTAAAGCAACCTGTTGCCTTCTCTGTCAGGCATTTCCTTTGCACGGAGAGTATCACTATGGGGGTGCCAATAGCAGCATGGCCTATGCATTCAGACCAACCAAGGAACAGAGTTTTGGTGACAGAGGTGCTAAAGGTTGGTTTGGTTGTGAAGGATTGGACCCATAGAAATGTGTTGGTGACAACATCAGTTGTTGAGAATGTTGTGAGGAGGTTGATGGCAACAAAGGAAGGAGAAGAAATGAGACAAAGGGCAATGAACCTGAAAATTGTTATTCTCAAGTCAAAGGATGAAGGAGGTGTTTCTCGTGAGGAATTGGATTCTTTCATTGTGCATGTCACTAGGTGGTTTGGTTCAATCACACTCACAAAGATCAAGTTCAATTAG 519 0.4162 MVFEKTERKTNVNFVIDDGTGRIKCRRWNDMYVRVNGHLKTFQGVKQPVAFSVRHFLCTESITMGVPIAAWPMHSDQPRNRVLVTEVLKVGLVVKDWTHRNVLVTTSVVENVVRRLMATKEGEEMRQRAMNLKIVILKSKDEGGVSREELDSFIVHVTRWFGSITLTKIKFN. 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g02267 172 PANTHER GLYCOSYLTRANSFERASE 58 159 - -
Seca2g02267 172 SUPERFAMILY Nucleic acid-binding proteins 1 55 IPR012340 -
Seca2g02267 172 Gene3D Glycogen Phosphorylase B; 62 139 - -
Seca2g02267 172 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 59 159 - -
Seca2g02267 172 Gene3D Glycogen Phosphorylase B; 140 154 - -
Seca2g02267 172 Gene3D - 1 61 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g02267 Seca-Chr2 55086561 55088818 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g02267 1 82 Core DNA Replication Machinery Family AT2G24490 38.384 1.71e-12 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g02267 K13495 K13492 gmx:100799527 165.622