Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g02251 ATGGCCACCAACCAAGGTGTCCTCTCAAGTCTTGACAATGCCAAGACACAAAGCTACCATTACAAGGCAATTGTGATAGCTGGGATGGGATTCTTCACTGATGCATATGATCTCTTTTGCATTACTGCAGTTATCAAACTTATAGGGCGCCTGTACTACTTTGACCCCACTAGTCATAGTCCAGGAAAGCTTCCAACCAATGTAAACAATGCAATAACTGGGGTTGCATTGTGTGGTACCCTTGCAGGGCAACTCTTCTTTGGCTGGCTTGGTGACAAACTTGGTAGAAAAAAAGTTTATGGCATAACACTTGCCACTATGGTGGGTTGTGCCTTGGCATCAGGCCTTTCCTTTGGATCCACATCCAAAAGTGTGATTAATAGTCTCTGTTTCTTCCGGTTCTGGCTAGGATTTGGTATTGGTGGAGACTACCCTCTATCAGCTGTGATAATGTCTGAATATGCCAATCAGAAAACTAGAGGAGGTTTTATTGCTGCTGTCTTTGCTATGCAAGGAATAGGAATATTGGTTGCTGGGGGTGTGGCTATGTTGGTCTCCAAACTATTCTTAGCAACTTACCAAGCTGATAATTTTGCAAATGATCCTGTGCTATCTACTCAGCCAGAAGGAGATTTTGTTTGGAGAATTGTGCTCATGTTTGGTGCATTTCCTGCAGCCTTAACTTATTATTGGAGAATGAAAATGCCAGAAACTGCTAGGTACACTGCCTTGGTGGAAGGAGACCACAAGAAGGCTGTTGAAGATATGACCAAAGTTCTTGATAAGGACATACCTTTAGAAGCATCAAATACCAGGATTCCTTCCATGCCAAGCCCCACCCCCACTTATGGATTCTTCTCTTCAGAGTTTCTTAATAGGCATGGCCTCCACCTTCTAGGAACAACTAGCACCTGGTTCTTGTTGGATATTGCCTTCTATAGTCTTCAACTTACACAAAAAGACATTTATCCAGCCAGTGGACTTGTACCTAAGGCTTCCCAAATGAATGCCATAGAGGAAGTGTTTCAACTCTCCAAAGCAATGTTTGTGGTGGCCCTTCTTGCCACGGTTCCTGGGTACTGGTGCACAGTTTTCTTCATTGACAAGATTGGAAGGCACAAAATCCAGCTTTTGGGATTCCTTCTAATGTCTGTTTGTATGTGGTTTCTGGGACATAATTATGCACAATACAGGGGAGATTCTGAATGCGGGTTTGCCATACTTTTTGGACTTGCCCTCTTCTTTGCTAACTTTGGACCAAATAGCACCACATTTGTAGTCCCAGCAGAGCTGTTCCCTGCTAGGTTCCGTTCAACATGCCATGGGATATCTGCAGCAGCCGGAAAATCAGGAGCTATCATTGGTGCTTTTGTAGTGCAAAGCTATACAGATAATGCAGATGACAAAACAAAAGGAATCAAGAAGGCAATTATGGCACTTGCAGTTGTCAACTTGGTTGGATTCTTTTGCACTTTCTTGGTGCCAGAAACACAAGGTCGATCACTAGAAGAAATCTCAGGAGAGGAGAAAGATCTCCAGGGTAATATTACTCCAGATAATGCAAATGAGACAACAAATGATGCAAAAGAGGGAACAAGAAACACTAGTGCTGATAAATCTCCAGGAACTTCAGTAGTTTAG 1641 0.4308 MATNQGVLSSLDNAKTQSYHYKAIVIAGMGFFTDAYDLFCITAVIKLIGRLYYFDPTSHSPGKLPTNVNNAITGVALCGTLAGQLFFGWLGDKLGRKKVYGITLATMVGCALASGLSFGSTSKSVINSLCFFRFWLGFGIGGDYPLSAVIMSEYANQKTRGGFIAAVFAMQGIGILVAGGVAMLVSKLFLATYQADNFANDPVLSTQPEGDFVWRIVLMFGAFPAALTYYWRMKMPETARYTALVEGDHKKAVEDMTKVLDKDIPLEASNTRIPSMPSPTPTYGFFSSEFLNRHGLHLLGTTSTWFLLDIAFYSLQLTQKDIYPASGLVPKASQMNAIEEVFQLSKAMFVVALLATVPGYWCTVFFIDKIGRHKIQLLGFLLMSVCMWFLGHNYAQYRGDSECGFAILFGLALFFANFGPNSTTFVVPAELFPARFRSTCHGISAAAGKSGAIIGAFVVQSYTDNADDKTKGIKKAIMALAVVNLVGFFCTFLVPETQGRSLEEISGEEKDLQGNITPDNANETTNDAKEGTRNTSADKSPGTSVV. 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g02251 546 CDD MFS_PhT 24 497 - -
Seca2g02251 546 Pfam Sugar (and other) transporter 24 506 IPR005828 GO:0016020|GO:0022857|GO:0055085
Seca2g02251 546 Gene3D MFS general substrate transporter like domains 19 262 IPR036259 -
Seca2g02251 546 Gene3D MFS general substrate transporter like domains 268 522 IPR036259 -
Seca2g02251 546 MobiDBLite consensus disorder prediction 513 546 - -
Seca2g02251 546 FunFam Inorganic phosphate transporter 1-6 19 519 - -
Seca2g02251 546 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 23 504 - -
Seca2g02251 546 SUPERFAMILY MFS general substrate transporter 12 507 IPR036259 -
Seca2g02251 546 ProSiteProfiles Major facilitator superfamily (MFS) profile. 23 499 IPR020846 GO:0022857
Seca2g02251 546 MobiDBLite consensus disorder prediction 505 546 - -
Seca2g02251 546 NCBIfam phosphate:H+ symporter 11 508 IPR004738 GO:0005315|GO:0006817|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g02251 Seca-Chr2 54589397 54591079 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g02251 1 510 Inorganic Solute Cotransporters AT5G43360 62.572 0.0 659
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g02251 K08176 - gmx:100820250 913.294