Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g02228 ATGGTGAGAGAGCAGAGGGTGGATTCCTTCTACGCCAAGCTGCGGGATTCGGCACTTTCCTCTTCTTCCTCTCCTGTTCTCATTTTTCCTTCAACCTCTGACGTAGACTCCCTCTGCGCCCTCAAAATCATTTTCCACATCCTCGAATCTGATTCCATCCAATACGCTTGCTACCCTGTGTCGTCTTTCCGCGAGATCCACAAATACGCAAACCCCACCGCAAACGACGACCCAATCTCCATCGTTTTAATCAACTGGGGCAACCACAGGGACCTCCGCAAAACACTCAACTTAGGCCCGAACGCTCGCATCTTCGTCGTCGACAGCCACCGCCCCATCCACCTCCACAACCTCAACGACCAAAACGACACTGTCGTTGTTCTCTTCACTCAAGACGACGAAGACCAAGCAGATCTCGCTTACGACTTCCCTCTCTCCGCCCTAGCCAACGCCTCAACAAATTGGGACTCCGAATCAGAACCCGAAGACTCCGAATCCGAATCCGACTCCGAAAGCGACGAAGAAGAAGAATCTAAAAGAAAAAGAAAGAGAGACTCAGAAGATGACGAAGATCCGATTAAACTCTACAGGAAGAAGAAGAAAGAGTACTATCGATTGGGAACTTTTCACGGAAAACCCTCGGGGTGTTTGATGTATGAACTAGCCCATTTTCTGAGGAAGAACACGAACGAATTGCTCTGGCTTGCTTGCGTGGCGTTAACGGACCAGTTCGTTCACGAGAGGCTAAGCGATGAAAGGTACCACGCCGGCGTCATGGAGCTTGAACAGTACATAAACAGTTCCGGCAATTTAGACGCCGTTACTTCGGTCACGCTGAAAGACGGTACCAAAATTCGTGCACCGAACTCATCTCGAATCGCCTACGAGGATGAACCGAGGCTCATGCTGTTACAGGAATGGAACCTCTTCGATTCTATGCTCTGTTCCTCCTACATCGCAACAAAATTGAAGACATGGAGTGACAATGGGATGAAGAAATTGAAGCTTCTGTTGGCTAGGATGGGGTTTGCACTCGCTGACTGTCAGCAGAAGTTTCAGTACATGAACGTTGAGGTGAAGCGGAAGATGAAGCATGAATTTGAGAGGTTTTTACCTGAATATGGTTTAACTGATTTATACTACCGAAGCTTTCTACGGATCCATGGGTATAGTTCAAGGGTCTCTGCTGCTGATGTGGTTTACGGTGTCACTGCACTTCTTGAGTCGTTTGTGAAATCGGATGGATCTTGTGCTTCAAAGCAGTTTGGGGTGGCTTATGATGCACTTTCCTTGAGCAATGTTGATAAGCTTAAAGCTGGGATGCAACACGCTATTAAGATTCAAAGGGCGATTTTGAGGCAAGGGAGCACTGCGATTATGAAAAATGGGTGTATACGTAGTGGGAGGAAGTTTCGGTGGGTGAAGCTGGAAGATTCAGTGGATGCTAAGTTGTTGGGGTACCCTCAGGCTTTGACCAAATTCTGTTATTTTCTAATGGATGCTTTGAAAGAGAAAGGGGCGAGGATGAAGCCTTTGCTTTGTGCTTGTTTGTCTCAGGAACCGAATAAAGTGCTTATTGTTGGGGTTTGTGGGAGGCCGCGTTTGGCTGGGGCTCAGGGAAACGCGTTTGGGATGGCGTTTAGGAATGCTGCGGAGGAGATTGGAGCAGAGTTTTTTCATGAGTTGTTTGAGTCGTCGTGGATTTTTCTTGATACTTCCGCGGTGAATTCCTTCATGGTAAGGTTGACTGAGAAGCTGTGA 1761 0.4787 MVREQRVDSFYAKLRDSALSSSSSPVLIFPSTSDVDSLCALKIIFHILESDSIQYACYPVSSFREIHKYANPTANDDPISIVLINWGNHRDLRKTLNLGPNARIFVVDSHRPIHLHNLNDQNDTVVVLFTQDDEDQADLAYDFPLSALANASTNWDSESEPEDSESESDSESDEEEESKRKRKRDSEDDEDPIKLYRKKKKEYYRLGTFHGKPSGCLMYELAHFLRKNTNELLWLACVALTDQFVHERLSDERYHAGVMELEQYINSSGNLDAVTSVTLKDGTKIRAPNSSRIAYEDEPRLMLLQEWNLFDSMLCSSYIATKLKTWSDNGMKKLKLLLARMGFALADCQQKFQYMNVEVKRKMKHEFERFLPEYGLTDLYYRSFLRIHGYSSRVSAADVVYGVTALLESFVKSDGSCASKQFGVAYDALSLSNVDKLKAGMQHAIKIQRAILRQGSTAIMKNGCIRSGRKFRWVKLEDSVDAKLLGYPQALTKFCYFLMDALKEKGARMKPLLCACLSQEPNKVLIVGVCGRPRLAGAQGNAFGMAFRNAAEEIGAEFFHELFESSWIFLDTSAVNSFMVRLTEKL. 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g02228 586 PANTHER CDC45-RELATED PROTEIN 1 585 IPR003874 GO:0006270
Seca2g02228 586 MobiDBLite consensus disorder prediction 158 173 - -
Seca2g02228 586 MobiDBLite consensus disorder prediction 152 192 - -
Seca2g02228 586 Pfam CDC45-like protein 26 585 IPR003874 GO:0006270
Seca2g02228 586 MobiDBLite consensus disorder prediction 174 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g02228 Seca-Chr2 54101131 54102891 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g02228 1 586 Core DNA Replication Machinery Family AT3G25100 72.259 0.0 893
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g02228 K06628 - cave:132187530 954.125