Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g02215 ATGGGTAGGATTGAGTTAGTTGAGAAAGTTGTGATTGCTCCAGAGCAACCAACACCCTGTAAGAGAATGTTCTTGTCAAATATTGACCTGTCCCTTGTTGTTTACCAAGACTCTGCCTCCTTTTTTGATCCTCCAAGCAACCAAATGAGCTTCTCTGAGATTTGTAGCAAATTATACAGTGCACTTAGTAAAATGCTTGTGCATTATGACTTTATGGCTGGCAGGCTAGTGCCAAGTATAGAGGAGAATGATAGGTTTGAAATAGATTGTAATGATGCAGGTATAGTAGTTGCTGCTGCAAGAACTGATAAAAAGTTAGGCGAATTTGGTAGGATTTCTGCACCTAATCCAGAGTTAAGGGAATTAGTTGTTTTCTTGTATGAAGAGGGTGAAGAAGAAATCAACCTGAAAGAAAAGCCCCTTGCGTCCTTACAGCTAACACAATTTGGTTGTGGAAGTTTGGCACTGGCTTCTCATTACAACCACTGCATATTGGATGGTATAGCAGTCAGAGATTTTGAGGTAAATTTGGCTGCTTTGACACGTGGTGATGACCTTATCATAGTACCTAATGCAGATAGGACATTGCTAAGGGCTCAAAACCCTCCAAAGATAAAGCATCCACATTTTGAGTATTCAAAATCTACTGGCATAGAGAACTTGTTTACTATACGTGGTACAAGTGGCATCAATGCTAGACAATCCCTGGAAGAAAATCAAATTCATGTGCTTTATTTATCACCACAAAAAATTGGCAGCTTTAAAAAGAAAGCTCTGAAGAACAGCAACTTAAAGAACAGCACCACTTTTCAAGTTATTGCTGCAAAAATATGGAAGGCAAGAAGTATTGCAACAAAGATGCCAGAGGATACAGTATCCACAATGTTGTTTCCAGTGGATGTTAGGAAAAGGATTGTTCCTGAACTTCCAGATGGATTTGCAGGCAATGCATTGGTTCCTGGCTTTGCAAGAGCAACTGTGAGGGAACTCATGGAATTAGATGATGCTTGTCACATAAGGAAAGTACAAGAAGGGATTGAAAGATTGGATGATGAGTACATTAAGTCAGGTATAGATTGGTTAGAGGTGAACAGAGGGGTGCCTTGTAGGGATGACAGTTTCTCCTTGGTGGCATGGTGGAGATTGGGGCTAGAGGAGCAACTTTTTGCATGGGGTAAACTAAAATGTGCCACTCCACTTGCAGTTAAGCCTGGTTTGGTCATGCTGTTGCCAGGGGCACAAGATGAAGGGGGTCTTAGTATATGCCTAAATTTACCTGAGGATCAAATGCAAGAGTTTTGTAGGATAATGCTAGAAATTTAA 1323 0.4059 MGRIELVEKVVIAPEQPTPCKRMFLSNIDLSLVVYQDSASFFDPPSNQMSFSEICSKLYSALSKMLVHYDFMAGRLVPSIEENDRFEIDCNDAGIVVAAARTDKKLGEFGRISAPNPELRELVVFLYEEGEEEINLKEKPLASLQLTQFGCGSLALASHYNHCILDGIAVRDFEVNLAALTRGDDLIIVPNADRTLLRAQNPPKIKHPHFEYSKSTGIENLFTIRGTSGINARQSLEENQIHVLYLSPQKIGSFKKKALKNSNLKNSTTFQVIAAKIWKARSIATKMPEDTVSTMLFPVDVRKRIVPELPDGFAGNALVPGFARATVRELMELDDACHIRKVQEGIERLDDEYIKSGIDWLEVNRGVPCRDDSFSLVAWWRLGLEEQLFAWGKLKCATPLAVKPGLVMLLPGAQDEGGLSICLNLPEDQMQEFCRIMLEI. 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g02215 440 Pfam Transferase family 4 433 - -
Seca2g02215 440 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 12 430 - -
Seca2g02215 440 Gene3D - 229 440 IPR023213 -
Seca2g02215 440 Gene3D - 2 214 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g02215 Seca-Chr2 53646477 53648195 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g02215 3 440 Monolignol Biosynthesis Gene Families AT5G48930 27.069 1.63e-56 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g02215 K15400 - gmx:100801822 730.709