Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g02135 ATGGGTCTCAGCAAGTGCACAAATTCGTTATTGGTTTTAATCACATTCTGTTTTTATTTTTCAGAAGTCAGTGTTTCCATAGACACCATCACATCATCCCATTTCATCAAGGACCCTGAAACTCTAAGCTCCAATAGTGGTAACTTCACCTTTGGCTTCTTCAGCCCTGTAAATTCTACAAATCGCTACGTCGGAATTTGGTGGAAGCCCAAATTCACTGTCATATGGGTGGCTAACAGAAACCAACCACTGAATGATTCTTCAGGGATTGTCACAATATCTGAAGATGGCAATCTTGTGGTATTGAATGGACAGAAACAAGTCATTTGGTCATCCAATGTTTCCCACCTTGGAACCAATACAAGTTCCAAACTTTTAGATTCAGGGAACCTTGTACTGCTTCAAGGTATAACAGGAAGCACTGTATGGCAGAGTTTCGAGCACCCTTCAAATACATTATTGTCTGGAATGAAACTTTCAAGCAACAAAAGAACAGGTGAGAAAGTAAAACTCACATCATGGAATACCCCTTCTGATCCATCCATTGGGAGCTTCTCTTTAAGTGTTGAACGTCTTAGTATACCTGAATTGTTCATTTGGAATGGAACTAGTCCATTCTGGCGCACTGGACCGTGGAATGGTAAGCTATTTACTGGGGTGCCTGTAATGAGAACTTTCTATCTTGGTGGTTTTCGTGTTGGAGATGATGGACAAGGAAGAGTTGAACTCTCTGGCACAGAAGTTGCTGAGGTTGGTTTCATAATCTATATCCTGAATTCACAGGGGAATGTTCAAGAGAATTGGTGGGATGAAGAGAAGAAGGAATGGGAAGTAAGATGGAATAGTCATCAATTGGATTGTGATGTTTATGGTTTATGTGGGCATTTTGCAAGGTGTAGTTCAGAGAGCTTACCAATATGCAGCTGTTTGAGAGGGTTTGAGCCAAGGAACAAAGAGGAATGGAATAGACAAAATTGGACTAGTGGGTGTGTTAGGAGGAAACCTCTGCAGTGTGAAAGAGTTAGCAATAAAAGCACAAGTGCAGACAATAAAGAAGATGGGTTTTTGAAACTGCAGATGATTAAAGTTCCAGATTTTGCAGATGGGTCATCTCTCACACTCACACCAGATACATGCAGAAGCCAGTGCTTGGGGAATTGCTCTTGTGTTGCTTATTCATATGATGCTGACATTGGTTGTATGTCTTGGACTGGGAATCTAATTGATATACAACAATTTTCAACAGGAGGACTTGATCTATATGTTCGTGTAGCCTACACTGAACTTGATAAAGAGAGAAACATGACAGCCATCATTACTATTGCAGTGACAGCAGGATCTGTCTTAATTCTCACTTGTTCATATGTTATGTGGAGAAGGATTTCTAACCACCATGCAAGAAAACAGAACACCAAAAGATTACTACAACTTAATAGAAGGAAAGCACCTGCAGCATATACAAGCGATAATGTAATTGGAGAACTGTCACAAGCTAAACTCCAGGAGCTATTAATATTTGATTTTGGAAAGCTTGCAACTGCCACAAACAATTTTCACTCATCCAACAAACTTGGGAAGGGTGGTTTTGGTCTAGTATACAAGGGGCAACTGGAAGATGGTCAGGAAATAGCAATTAAAAGACTTTCTAGAGCATCTGGACAAGGTCTAGAAGAATTCAAGAATGAAGTAATGGTAATTTGTAAGCTTCAACACCGCAATCTTGTAAGACTTCTTGGCTGCTGTATTGAAGGAGAGGAAAAGATGTTGATATATGAGTACATGCCAAACAAAAGTTTGGATGCATTTCTCTTTGATCCATCAAAAAGTAAAACTCTTGATTGGAGAAAACGGTATAGCATAATAGAAGGAACAGCTCGGGGATTGCTTTATCTTCATAGAGATTCAAGGCTAAAAATCATACATAGAGATTTGAAGGCAAGTAATATCTTGCTAGATGAGGATCTAAATCCAAAAATATCTGACTTTGGTATGGCTAGAATATTTGGTAGGAATGAGGATGAGGCCAACACTGGTAGGATTGTTGGAACGTATGGCTATATGTCTCCTGAATATGCAATGCAAGGACTGTTTTCTGAGAAATCAGATGTCTTTAGCTTTGGAGTTTTGCTACTGGAAATTGTTAGTGGAAGACGAATTTCAAGATTTTATGACCATGAGAATTCTCTTACCCTTTTAGGATTTGTAAGTCTCTAA 2214 0.3925 MGLSKCTNSLLVLITFCFYFSEVSVSIDTITSSHFIKDPETLSSNSGNFTFGFFSPVNSTNRYVGIWWKPKFTVIWVANRNQPLNDSSGIVTISEDGNLVVLNGQKQVIWSSNVSHLGTNTSSKLLDSGNLVLLQGITGSTVWQSFEHPSNTLLSGMKLSSNKRTGEKVKLTSWNTPSDPSIGSFSLSVERLSIPELFIWNGTSPFWRTGPWNGKLFTGVPVMRTFYLGGFRVGDDGQGRVELSGTEVAEVGFIIYILNSQGNVQENWWDEEKKEWEVRWNSHQLDCDVYGLCGHFARCSSESLPICSCLRGFEPRNKEEWNRQNWTSGCVRRKPLQCERVSNKSTSADNKEDGFLKLQMIKVPDFADGSSLTLTPDTCRSQCLGNCSCVAYSYDADIGCMSWTGNLIDIQQFSTGGLDLYVRVAYTELDKERNMTAIITIAVTAGSVLILTCSYVMWRRISNHHARKQNTKRLLQLNRRKAPAAYTSDNVIGELSQAKLQELLIFDFGKLATATNNFHSSNKLGKGGFGLVYKGQLEDGQEIAIKRLSRASGQGLEEFKNEVMVICKLQHRNLVRLLGCCIEGEEKMLIYEYMPNKSLDAFLFDPSKSKTLDWRKRYSIIEGTARGLLYLHRDSRLKIIHRDLKASNILLDEDLNPKISDFGMARIFGRNEDEANTGRIVGTYGYMSPEYAMQGLFSEKSDVFSFGVLLLEIVSGRRISRFYDHENSLTLLGFVSL. 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g02135 737 ProSiteProfiles PAN/Apple domain profile. 338 425 IPR003609 -
Seca2g02135 737 SMART blect_4 33 149 IPR001480 -
Seca2g02135 737 CDD PAN_AP_plant 335 425 - -
Seca2g02135 737 PIRSF SRK 2 736 IPR024171 GO:0004674
Seca2g02135 737 FunFam Lectin-domain containing receptor kinase A4.3 594 736 - -
Seca2g02135 737 Gene3D Transferase(Phosphotransferase) domain 1 594 736 - -
Seca2g02135 737 ProSiteProfiles Protein kinase domain profile. 518 737 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca2g02135 737 ProSitePatterns Serine/Threonine protein kinases active-site signature. 639 651 IPR008271 GO:0004672|GO:0006468
Seca2g02135 737 SUPERFAMILY alpha-D-mannose-specific plant lectins 64 214 IPR036426 -
Seca2g02135 737 Gene3D - 21 147 IPR036426 -
Seca2g02135 737 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 23 146 - -
Seca2g02135 737 SUPERFAMILY Protein kinase-like (PK-like) 502 726 IPR011009 -
Seca2g02135 737 ProSitePatterns Protein kinases ATP-binding region signature. 524 546 IPR017441 GO:0005524
Seca2g02135 737 Pfam S-locus glycoprotein domain 207 316 IPR000858 GO:0048544
Seca2g02135 737 Pfam PAN-like domain 350 410 IPR003609 -
Seca2g02135 737 SMART ntp_6 350 424 IPR003609 -
Seca2g02135 737 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 484 593 - -
Seca2g02135 737 Pfam D-mannose binding lectin 73 174 IPR001480 -
Seca2g02135 737 CDD B_lectin 33 149 IPR001480 -
Seca2g02135 737 Gene3D Phosphorylase Kinase; domain 1 470 593 - -
Seca2g02135 737 Pfam Protein tyrosine and serine/threonine kinase 520 716 IPR001245 GO:0004672|GO:0006468
Seca2g02135 737 CDD STKc_IRAK 524 718 - -
Seca2g02135 737 ProSiteProfiles Bulb-type lectin domain profile. 27 146 IPR001480 -
Seca2g02135 737 SMART serkin_6 518 735 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca2g02135 737 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 13 720 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g02135 Seca-Chr2 50036530 50040299 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g02135 427 735 Receptor kinase-like Gene Family AT4G05200 56.129 5.21e-105 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Seca2g02135 PK_Tyr_Ser-Thr 4.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g02135 - - tpra:123892366 1038.87