Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g02132 ATGGGTTTCAGAAGCTGCAGAAATTTGTCCTCTTTTCTCATTGTATTGTGTTGTTATTTATTATATGTTGTTGTTGTCACATCATCTCAAATCATCAAGGACCCTGAAACTCTAAGCTCCGAAAGTGGAAACTTCACGTTAGGGTTCTTCAGCCCTCAAAATTCTACAAATCGTTATGTAGGAATTTGGTGCAAGACTCAAACTGTGGTGTGGGTGTCTAACAGAAACCAACCACTGAATGATTCTTCCGGGGTTATTACAACATCTGATGATGGCAATCTTGTGGTGTTGAACGGACAGAAACAGGTCATTTGGTCCTCAAACGTGTCCAATATTGCATCCAATTCCAGTTTCCAACTTTCAGATGATGGTAGCCTTATCTTGATGGAAAACAATACAGGAAACACCATATGGGAGAGTTTCAACCATCCTTCTAATACATTATTGCCCCATATGAAACTCACAAACAACAAAATAACAGGTGAGAAAGTAGAACTTACATCATGGAAAAGCCCTTCTAATCCATCCATTGGAAGCTTCTCTTTCAGTATTGAACGCCAAAAGATTCCTGAAATTTTCATTTGGAATGAAACTCGACCATATTGGCGCAGTGGTCCGTGGAATGGTCAAGTCTTTCTAGGGATATATGACATGGGAATTTATTATATGAATGGTTTTGGTGTTGAAAAAGATAGGGACAGAACTGTCGGTGTATATTTCACGGTAGATGGCTTCGGAATCGTTATCTATATCTTAAATTCAAAAGGACAACTTCAAGAAAATAATTGGATTGATGAGAAGGAGGAATGGCAAGTTACATGGACTAGTCAACAATCGAGTTGTGATGTTTATGGTATATGTGGGGAATTTGCAATCTGTAATTCAAAAGGCTCACCAATATGCAGCTGTTTGAAGGGGTTTGAACCAAGGAACAAGCAGGAATGGGATGGACAAAACTGGACTGGTGGATGCATTAGGAGAACACCTCTTCAATGTGAAAGGGCCAACAATCAAAGCACAAGTAATAAAGCAGATGGATTTCTGGAATTAAAGATGATCAAAGTTCCTGATTTGGCTGAACCATCATCTGTTACAAAAGACACATGTAGAAGCCAGTGTTTGCAGAATTGCTCTTGCCTTGCATATTCCTATGATGCTGTTATTGGTTGTATGACTTGGAATGGGAGTCTAATTGACATACAACAATTCCCAAGTGGAGGAACTGATCTATACATTCGTGTAGCCTCTGAAGAACTTGGTAAAGGGCGTAACATGACAGTCATCGTTACAGTTTCTGTGATAATAGGAATTATCATAATTGCCACGGGTGTATGTGTCATTTGGAGAAGGGCTTCACACCCAGGGAGGACCAAAAAGAACCGTAGATTTTTACGAATTAACAAAGGTGAAAAATCTGAAGAATACTCAAGTGAGAACGTACTTGGAGAATTGTCACAAGCCAAGTTACAAGAGTTAGTACTATTTAATTTTGAAAAGGTTGCAACTGCCACAAACAACTTCCACTTATCCAACAAACTTGGTCAGGGTGGTTTTGGTCCACTATACAAGGGGGAACTACAAGATGGTAAGGAAATAGCAGTTAAAAGACTTAGAAGAAATTCTGGACAAGGGCTAGAAGAATTCATGAATGAAGTAGTTGTGCTTTCTATGCTTCAACACCGCAATCTTGTAAGGCTTCTAGGCTGTTGCATTGAAGGAGACGAGAAGATGTTGATATATGAGTACATGCCAAATAAAAGTTTGGACAGATATGTGTTTGATCCATCAAAAAATAAACTCCTGGATTGGGAGGAACGGTTCAGCATAATAGAAGGAATAGCTCGAGGATTGCTTTATCTTCATAGAGATTCCAGGCTAAAAATCATACATAGAGATTTGAAGGCAAGTAATATCTTGCTAGATGTGGAGCTGAATCCAAAAATTTCAGACTTTGGTATGGCCAGAATCTTTGGAGGGAGTGAAGATCAAGCCAATACCCAAAGGGTTGTTGGAACATATGGCTATATGTCCCCTGAATATGCAATTCAAGGAGTGTTTTCAGAGAAATCAGATGTATTTAGCTTTGGAGTTTTGCTAATAGAGATTGTTAGCGGAAGACGAAACTCAAGCTTTCATGACAGTGAAAGTGCTCTGACCCTCTTAGGATTTGCATGGATAAAATGGAGGGACGACAATATTTCGTCTTTAATAGATCCGGAAATATATGATAATAGCCTTCATAAGAATATTTTGAGGTGCATACACATAGGACTTTTATGTGTGCAAGAATCAGCTGCAGACAGGCCTACTATGGCTGCAGTAATCTCTATGCTTAACAGTGAGATTATGGACCTTCCTCCTGCGAGGGAACCGGCATTTGTCCTGAGGCAGAATATGTTGAGTGCAGTCTCTTCTGAAGAAAGTATCAGATTGTATTCCATCAACGCTGTTAGTATTACAGACATCCACGGCAGATAG 2478 0.3939 MGFRSCRNLSSFLIVLCCYLLYVVVVTSSQIIKDPETLSSESGNFTLGFFSPQNSTNRYVGIWCKTQTVVWVSNRNQPLNDSSGVITTSDDGNLVVLNGQKQVIWSSNVSNIASNSSFQLSDDGSLILMENNTGNTIWESFNHPSNTLLPHMKLTNNKITGEKVELTSWKSPSNPSIGSFSFSIERQKIPEIFIWNETRPYWRSGPWNGQVFLGIYDMGIYYMNGFGVEKDRDRTVGVYFTVDGFGIVIYILNSKGQLQENNWIDEKEEWQVTWTSQQSSCDVYGICGEFAICNSKGSPICSCLKGFEPRNKQEWDGQNWTGGCIRRTPLQCERANNQSTSNKADGFLELKMIKVPDLAEPSSVTKDTCRSQCLQNCSCLAYSYDAVIGCMTWNGSLIDIQQFPSGGTDLYIRVASEELGKGRNMTVIVTVSVIIGIIIIATGVCVIWRRASHPGRTKKNRRFLRINKGEKSEEYSSENVLGELSQAKLQELVLFNFEKVATATNNFHLSNKLGQGGFGPLYKGELQDGKEIAVKRLRRNSGQGLEEFMNEVVVLSMLQHRNLVRLLGCCIEGDEKMLIYEYMPNKSLDRYVFDPSKNKLLDWEERFSIIEGIARGLLYLHRDSRLKIIHRDLKASNILLDVELNPKISDFGMARIFGGSEDQANTQRVVGTYGYMSPEYAIQGVFSEKSDVFSFGVLLIEIVSGRRNSSFHDSESALTLLGFAWIKWRDDNISSLIDPEIYDNSLHKNILRCIHIGLLCVQESAADRPTMAAVISMLNSEIMDLPPAREPAFVLRQNMLSAVSSEESIRLYSINAVSITDIHGR. 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g02132 825 CDD PAN_AP_plant 328 415 - -
Seca2g02132 825 Gene3D Transferase(Phosphotransferase) domain 1 583 785 - -
Seca2g02132 825 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 13 769 - -
Seca2g02132 825 Pfam S-locus glycoprotein domain 202 310 IPR000858 GO:0048544
Seca2g02132 825 Pfam D-mannose binding lectin 68 170 IPR001480 -
Seca2g02132 825 SUPERFAMILY alpha-D-mannose-specific plant lectins 60 209 IPR036426 -
Seca2g02132 825 SUPERFAMILY Protein kinase-like (PK-like) 491 778 IPR011009 -
Seca2g02132 825 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 583 786 - -
Seca2g02132 825 ProSitePatterns Serine/Threonine protein kinases active-site signature. 628 640 IPR008271 GO:0004672|GO:0006468
Seca2g02132 825 ProSiteProfiles PAN/Apple domain profile. 332 415 IPR003609 -
Seca2g02132 825 CDD STKc_IRAK 513 779 - -
Seca2g02132 825 Gene3D Phosphorylase Kinase; domain 1 473 582 - -
Seca2g02132 825 FunFam receptor-like serine/threonine-protein kinase SD1-8 478 582 - -
Seca2g02132 825 SMART blect_4 29 144 IPR001480 -
Seca2g02132 825 ProSiteProfiles Protein kinase domain profile. 507 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca2g02132 825 SMART serkin_6 507 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca2g02132 825 CDD B_lectin 29 144 IPR001480 -
Seca2g02132 825 ProSiteProfiles Bulb-type lectin domain profile. 23 141 IPR001480 -
Seca2g02132 825 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 21 141 - -
Seca2g02132 825 Gene3D - 24 142 IPR036426 -
Seca2g02132 825 SMART ntp_6 342 414 IPR003609 -
Seca2g02132 825 Pfam PAN-like domain 342 400 IPR003609 -
Seca2g02132 825 PIRSF SRK 4 825 IPR024171 GO:0004674
Seca2g02132 825 Pfam Protein tyrosine and serine/threonine kinase 508 777 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g02132 Seca-Chr2 49714964 49719025 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g02132 463 825 Receptor kinase-like Gene Family AT4G23140 52.406 9.48e-125 388
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Seca2g02132 PK_Tyr_Ser-Thr 4.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g02132 - - gmx:100779455 1105.12