Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g02130 ATGGGTTTCAGTAACAGTGCAAATTTGTTCCCTGTTTTGTTCATGCTGTGTTGTTATTTGTTACATGTTGGTATTGCAATAGGCACCAACACATCATCTCAATTTATCAAGGACCCTGAGACTCTAAGCTCCAAAGATGGCAACTTCACGTTGGGGTTCTTCAGCCCTCAAAATTCTACAAATCGTTATGTTGGAATTTGGTGGAAGTCTCAGTCCACAATCATATGGGTGGCTAACAGAAATCAACCACTGAATGATTCTTCAGGGATTGTCACAATATCTGATGATGGCAATCGTGTGGTATTGAATGGACAGAAAAGAGTCATTTGCTCAAAAGGAAACATCATATGGCAGAGTTTTCAGCAACCTTCAGATACATTACCACCCAGTATGAAACTTTCGAGCAGCAGAAGAACTGGTAAGACTGTAAAACTTTCATCATGGAAAAGCCCTTTGAATCCATCAATTGGGAGATTCTCTTCTAGTCCTGTTGAACGCCTAAATATACTTGAAGTGTTCATTTGGAATGAAACTCAACCATACTGGCCTAGTGGTCCGTGGAATGGAATTTATCAAGAGAAATGGTGGGATGATGAGAATAAAGAGGTGTATGTTAAATGGGCTAGCCAAGAATCAGAGTGTGATGTTTATGGAATATGTGGGGCATTTGCAATTTGTACTTCACAGAGCTCACCAATATGCAGCTGTTTGAAAGGGTTTGACCCAAAGAACAAAGAGGAATGGAATAGACAAAACTGGACTAGTGGGTGTGTTAGGAGGACACCTTTGCAGTGTGAAAGGGTCAACAATCAAAACACAAGGGTGGATACAAAAACAGATGGGTTTCTGAAACTGCAAATGGTTAAAGTACCAGATTTTGCAGAAGGGTCACCTGTTACACCAGACATATGTAGAAGCCAATGCTTGGAGAATTGCTCTTGCATTGCATATTCGCATGATGCAGGGATTGGCTGTATGACTTGGGCTGGGAATCTACTTGACATACAACAATTCTCAAAAGGAGGACTTGATCTATATGTCCGTGTACCCTATATAGAACTTGACAAAGGAACAAACACAAAAATAATCATAACAGTTGCAGTGATAATAGGAACTGTCATAGTTGTCATTTGTGCATATATCATGTGGAGAAGAACTTCTAAGCAACCAGCTAAACTGTGGCACTCTATTAAATCAGCAAGGAAAAAGAACAGAAAAGCTTTCCTATTTTTTAATAAAGTTGGAACATCAGAAAATGACAGCATAATTGGAGAACCGTCACAATTGTTGTCTCTTAATATTTTCTTCCAGGGGAAACTGCAAGACGGTCAAGAAATAGCAGTTAAACGACTTTCTAGAGCATCTGGACAAGGGCTAGAAGAATTCAAGAATGAAGTAGTCGTGATTTGTAAGCTTCAAAACTGCAATCTTGTAAGGCTTCTTGGCTGCTGTATTGAAGGTGATGAAAACATGTTGATATATGAGTACCTGCCTAACAAAAGTTTGGATGCTTTTGTCTTTGATCCATCAAAAAGCAAACTCCTAGATTGGAGGACGCGCTGTAGCATAATAGAAGGAATAGCTCGAGGATTGCTCTATCTTCACAGAAATTCCAGACTAAGAATCATAAACAGAGATTTGAAAGCAAGTAATATCTTGTTAGATGAGGAGTTGAATCCAAAAATATCAGACTTTGGAATGGCTAGAATCTTTGGTCGGAGTGAAAGTCAGGCCAACACAAACAGAATTGTTGGAACTTATGGTTATATGTCCCCTGAATATGCAATGCAAGGACTATTTTCAGAGAAATCAGATGTCTTTAGCTTTGGTGTTTTGATACTAGAGATTGTTAGTGGGAGAAGAAACTCAAGCTTTTATGACAATGAGTGTGCTCTGAGCCTTTTAGGATTTGTCTGGATACAATGGAGGGAAGGCAATATTTTATCTTTAATAGATCCAATAATATATGATCCTAGTCATCATGAGCATATTTTAAGATGCATACACATAGGACTTCTGTGTGTACAAGAACTTGCTGTAGACAGGCCCACTATGGCTGCTGTAATTTCTATGCTTAATAGTGTGGTTGGATCTCTTCCTCCTCCTAGTCAATCTGCATTCATCCTGAGGCAGAATATGTTGAATTCAGCATCATCTGAAGAAAGTCAAAGATTATGTTCTATCAATACTGTTAGTATTACAGACATCCATGGTAGATAG 2220 0.3878 MGFSNSANLFPVLFMLCCYLLHVGIAIGTNTSSQFIKDPETLSSKDGNFTLGFFSPQNSTNRYVGIWWKSQSTIIWVANRNQPLNDSSGIVTISDDGNRVVLNGQKRVICSKGNIIWQSFQQPSDTLPPSMKLSSSRRTGKTVKLSSWKSPLNPSIGRFSSSPVERLNILEVFIWNETQPYWPSGPWNGIYQEKWWDDENKEVYVKWASQESECDVYGICGAFAICTSQSSPICSCLKGFDPKNKEEWNRQNWTSGCVRRTPLQCERVNNQNTRVDTKTDGFLKLQMVKVPDFAEGSPVTPDICRSQCLENCSCIAYSHDAGIGCMTWAGNLLDIQQFSKGGLDLYVRVPYIELDKGTNTKIIITVAVIIGTVIVVICAYIMWRRTSKQPAKLWHSIKSARKKNRKAFLFFNKVGTSENDSIIGEPSQLLSLNIFFQGKLQDGQEIAVKRLSRASGQGLEEFKNEVVVICKLQNCNLVRLLGCCIEGDENMLIYEYLPNKSLDAFVFDPSKSKLLDWRTRCSIIEGIARGLLYLHRNSRLRIINRDLKASNILLDEELNPKISDFGMARIFGRSESQANTNRIVGTYGYMSPEYAMQGLFSEKSDVFSFGVLILEIVSGRRNSSFYDNECALSLLGFVWIQWREGNILSLIDPIIYDPSHHEHILRCIHIGLLCVQELAVDRPTMAAVISMLNSVVGSLPPPSQSAFILRQNMLNSASSEESQRLCSINTVSITDIHGR. 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g02130 739 ProSiteProfiles PAN/Apple domain profile. 265 350 IPR003609 -
Seca2g02130 739 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 497 699 - -
Seca2g02130 739 SMART blect_4 33 154 IPR001480 -
Seca2g02130 739 PIRSF SRK 3 195 IPR024171 GO:0004674
Seca2g02130 739 PIRSF SRK 190 739 IPR024171 GO:0004674
Seca2g02130 739 Gene3D Phosphorylase Kinase; domain 1 415 496 - -
Seca2g02130 739 Pfam S-locus glycoprotein domain 188 244 IPR000858 GO:0048544
Seca2g02130 739 Pfam PAN-like domain 277 335 IPR003609 -
Seca2g02130 739 SUPERFAMILY alpha-D-mannose-specific plant lectins 65 154 IPR036426 -
Seca2g02130 739 SUPERFAMILY Protein kinase-like (PK-like) 439 726 IPR011009 -
Seca2g02130 739 ProSiteProfiles Protein kinase domain profile. 408 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca2g02130 739 SMART ntp_6 277 349 IPR003609 -
Seca2g02130 739 Pfam Protein tyrosine and serine/threonine kinase 441 622 IPR001245 GO:0004672|GO:0006468
Seca2g02130 739 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 92 716 - -
Seca2g02130 739 Gene3D Transferase(Phosphotransferase) domain 1 497 699 - -
Seca2g02130 739 Pfam D-mannose binding lectin 112 149 IPR001480 -
Seca2g02130 739 Pfam D-mannose binding lectin 73 111 IPR001480 -
Seca2g02130 739 SMART serkin_6 436 664 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca2g02130 739 ProSiteProfiles Bulb-type lectin domain profile. 27 157 IPR001480 -
Seca2g02130 739 CDD B_lectin 33 123 IPR001480 -
Seca2g02130 739 CDD PAN_AP_plant 261 350 - -
Seca2g02130 739 Gene3D - 28 149 IPR036426 -
Seca2g02130 739 FunFam Cysteine-rich receptor-like protein kinase 11 423 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g02130 Seca-Chr2 49701150 49704380 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g02130 436 739 Receptor kinase-like Gene Family AT4G11530 56.774 1.28e-112 354
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Seca2g02130 PK_Tyr_Ser-Thr 1.3e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g02130 - - gmx:113002415 1077