Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g02129 ATGGGTTTCAGAAGCTGCAGAAGTTCGTCCTCTGTTTTCATCATATCATGTTGTTATTTATTAGGTGTTGTTGTTGTCACGTCATCTCAAATCATCAAGGACCCTGAAACTCTAAGCTCAGACAGTGGAAACTTCACGTTGGGGTTCTTCAGCCCTCAAAATTCTACAAATCGTTATGTAGGAATTTGGTGCAAATCTCAACAAACTGTGGTGTGGGTGGCTAACAGAAACCAACCACTGAATGATTCTTCCGGGGTTATTACAATATCTGATGATGGCAATCTTGTGGTGTTGAACGGACAGAAAGATGTCATTTGGTCCTCAAATGTGTCCAATATTGCATCCAATTCTAGTTTCCAACTTTCATATTATGGAAGCCTTGTCTTGATGGAAAACACAACGGGAAGAACCACATGGGAGAGTTTCAACCATCCTTCCAATACATATTTGCCCAATATGAAACTTAAAAGCAACAGAGTAACAGGTGAGAAGGTACAACTTACTTCATGGAAAAGTCCTTCTAATCCATCCATTGGAAACTTCTCTCTCAGTATTGAACGCCTAAAGATTCCTGAAATTTTCGTTTGGAATGAAAATCGACCATATTGGCGTAGTGGTCCGTGGAATGGTCAAATCTTTATAGGGGTATGGGACATGGGAGCTTCTTATATGAACGGTTTTCGTTTGGAAAATGAAAGGGACGGAACTGTTGATTCATATTTTACAGTAGATGACCTCGGACTCGTGATCTATATCTTGAATTCAAAAGGCCAAATTCTAGAAAATACTTGGATTGACGAGGAGGAGGAATGGCAAGTCACATGGAGTAGTCAACAATCCAATTGTGATGTTTATGGTATATGTGGGGAATTTGCAATCTGTAATTCACAAGCCACACCAATATGCAGCTGTTTGGAAGGGTTTGAACCAAGGAACATACAAGAATGGAATGGACAAAACTGGACTGGTGGATGCATTAGGAGGACACCACTTCAATGTGAAAGGGCCAACAATGAAAGCACAAGTAATAAAGCAGATGGGTTTCTGGAATTACAGATGGTCAAAGTTCCTGATTTTGCTGAGCCATCATCTGTTACACAAGACACATGTAGAAGCCAGTGTTTGGAGAGTTGCTCTTGCTTTGCATATTCCTATGATGCTGTTATTGGTTGTATGTCTTGGAATGGGAGTCTAATTGACATACAACAATTCCCTAGTGGAGAAACTGATCTATACATTCGTGTAGCCTCTGAAGAACTTGTTACAGGTAAAGGGCGTAACATAACAGTCATCGTTACAGTTACTGTGATAATAGGGATTATCATAATTGTAACTGGTGTATGTGTCATTTGGAGAAGGGCTTCACACTCAGCTAAACTATGTTACTCTAATCAATCAGGGAGGACCAAAAAGAACCGTAGATTTTTACGACTTAACAAAGGTGAAAAATCTGAAGAATACTCAAGTGAGAACGTACTTGGAGAATTGTCACAAGCCAAGTTACAAGAGTTAGTACTATTTAATTTTGAAAAGGTTGCAACTGCCACAAACAACTTCCACTTATCCAACAAACTTGGGCAGGGTGGTTTTGGTCCAGTATACAAGGGGGAACTACAAGATGGTAAGGAAATTGCAGTTAAAAGACTTAAAAGAGCATCAGGACAAGGGTTAGAAGAATTCATGAATGAAGTAGTAGTGCTTTCTAAGCTTCAACACCGCAATTTGGTTAGGCTTCTAGGCTGTTGCATTGAAGGAGACGAGAAGATGTTGATATATGAGTACATGCCAAATAAAAGTTTGGATGGATATGTGTTTGATCCATCAAAAAATAAACTCCTGGATTGGGAAAAACGCTTTAGCATAATAGAAGGAATAGCTCGAGGATTGCTTTATCTTCATAGAGATTCCAGGCTAAAAATCATACATAGAGATTTGAAGGCAAGTAATATCTTGCTAGATGAGGAGCTGAATCCAAAAATTTCAGACTTTGGTATGGCCAGAATCTTTGGAGGGAGTGAAGATCAAGCCAATACCCAAAGGGTCGTTGGAACATATGGTTATATGTCCCCTGAATATGCAATTCAAGGAGTGTTTTCAGAAAAATCTGATGTCTTTAGCTTTGGAGTTTTGCTAATAGAGATTGTTAGTGGAAGACGAAACTCAAGCTTTCATTACACTGAAAGTGCTCTGACCCTCTTAGGATTTGCTTGGATAAAATGGAGGGACGACGATATTTCATCTTTAATAGATCCAGAAATATATGATCACAGCCTTCATAAGAATATTTTGAGGTGCATACACATAGGACTTTTATGCGTGCAAGAATCTGCTGCAGACAGGCCTACTATGGCTGCAGTAATTTCTATGCTTAACAGTGAGATTATGGACCTTCCTCCTGCAAGGGAACCTGCATTTGTCCTGAGGCAGAATATGCTGAGTTCAGTGTCCTTTGAAGAAAGCATTAGATTGTACTCCATCAACACTGTCAGTATTACAGACATCCAAGCCAGATAG 2514 0.395 MGFRSCRSSSSVFIISCCYLLGVVVVTSSQIIKDPETLSSDSGNFTLGFFSPQNSTNRYVGIWCKSQQTVVWVANRNQPLNDSSGVITISDDGNLVVLNGQKDVIWSSNVSNIASNSSFQLSYYGSLVLMENTTGRTTWESFNHPSNTYLPNMKLKSNRVTGEKVQLTSWKSPSNPSIGNFSLSIERLKIPEIFVWNENRPYWRSGPWNGQIFIGVWDMGASYMNGFRLENERDGTVDSYFTVDDLGLVIYILNSKGQILENTWIDEEEEWQVTWSSQQSNCDVYGICGEFAICNSQATPICSCLEGFEPRNIQEWNGQNWTGGCIRRTPLQCERANNESTSNKADGFLELQMVKVPDFAEPSSVTQDTCRSQCLESCSCFAYSYDAVIGCMSWNGSLIDIQQFPSGETDLYIRVASEELVTGKGRNITVIVTVTVIIGIIIIVTGVCVIWRRASHSAKLCYSNQSGRTKKNRRFLRLNKGEKSEEYSSENVLGELSQAKLQELVLFNFEKVATATNNFHLSNKLGQGGFGPVYKGELQDGKEIAVKRLKRASGQGLEEFMNEVVVLSKLQHRNLVRLLGCCIEGDEKMLIYEYMPNKSLDGYVFDPSKNKLLDWEKRFSIIEGIARGLLYLHRDSRLKIIHRDLKASNILLDEELNPKISDFGMARIFGGSEDQANTQRVVGTYGYMSPEYAIQGVFSEKSDVFSFGVLLIEIVSGRRNSSFHYTESALTLLGFAWIKWRDDDISSLIDPEIYDHSLHKNILRCIHIGLLCVQESAADRPTMAAVISMLNSEIMDLPPAREPAFVLRQNMLSSVSFEESIRLYSINTVSITDIQAR. 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g02129 837 ProSiteProfiles Bulb-type lectin domain profile. 23 142 IPR001480 -
Seca2g02129 837 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 14 781 - -
Seca2g02129 837 ProSitePatterns Serine/Threonine protein kinases active-site signature. 640 652 IPR008271 GO:0004672|GO:0006468
Seca2g02129 837 CDD B_lectin 29 145 IPR001480 -
Seca2g02129 837 Gene3D Phosphorylase Kinase; domain 1 479 594 - -
Seca2g02129 837 ProSiteProfiles Protein kinase domain profile. 519 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca2g02129 837 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 21 142 - -
Seca2g02129 837 PIRSF SRK 5 837 IPR024171 GO:0004674
Seca2g02129 837 SMART ntp_6 343 415 IPR003609 -
Seca2g02129 837 CDD STKc_IRAK 525 791 - -
Seca2g02129 837 ProSiteProfiles PAN/Apple domain profile. 333 416 IPR003609 -
Seca2g02129 837 Gene3D Transferase(Phosphotransferase) domain 1 595 797 - -
Seca2g02129 837 SMART serkin_6 519 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca2g02129 837 Pfam S-locus glycoprotein domain 203 311 IPR000858 GO:0048544
Seca2g02129 837 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 595 798 - -
Seca2g02129 837 Pfam D-mannose binding lectin 69 171 IPR001480 -
Seca2g02129 837 Gene3D - 24 143 IPR036426 -
Seca2g02129 837 FunFam receptor-like serine/threonine-protein kinase SD1-8 490 594 - -
Seca2g02129 837 CDD PAN_AP_plant 329 416 - -
Seca2g02129 837 SUPERFAMILY Protein kinase-like (PK-like) 503 790 IPR011009 -
Seca2g02129 837 SUPERFAMILY alpha-D-mannose-specific plant lectins 60 210 IPR036426 -
Seca2g02129 837 Pfam PAN-like domain 343 401 IPR003609 -
Seca2g02129 837 Pfam Protein tyrosine and serine/threonine kinase 520 789 IPR001245 GO:0004672|GO:0006468
Seca2g02129 837 SMART blect_4 29 145 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g02129 Seca-Chr2 49694797 49699856 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g02129 507 837 Receptor kinase-like Gene Family AT4G11530 56.380 1.69e-123 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Seca2g02129 PK_Tyr_Ser-Thr 3.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g02129 - - gsj:114424251 1105.12