Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g02128 ATGAGCAAACCTGTGAATACAGATTCAGTTCCAACTGTCAACAAGAAAAGATTAAGGGTGGATCCTCAATCTGCACCTCTGGTTATTTCTGCAGCAGAAAATAGAAGTCCATCTTTGTTGGAAAAAAAAGACAAATCTACAAAAACATTGCTTAAAGATGTTAATTCTTCTGCTGACAGATTGAAAGATCCAAAGTATGGTATTCAGACAGTTATGGATGTTGACATAATAGGAAACAATAGACTCAGGTTTAAAGAAAGGGAGGAAAAGGATGAGGTTGTGAATCTTGAGACAAAACTGGATAAGAACCTACAAGTTTTTCTTCAGCCAAAACAAGTTCCAGTCAATAGGAAGATAAATCGTATACATGATTCTGATGAAGAAATGACTGAAGAAGAAACTACATCCAGTGAGGAATCTGAAGATGATGAGGCATCAATGATAAAGAACAAAAAAAAAAAAAAAAAAAGACAGTGGCCATTTGGATCAAACTGTGTTAATCTTAACCTATTCAATTCAGTAATGGGTTTCACTTTCAGTAGCAGTGCAAATTTGTTCTCTGTTTTGTTCATGCTGTGTTGTTATTTGTTACATGTTGGTATTGCAATAGACACCATCACATCATCTCAATTTATCAAGGACCCTGAGACTCTAAGCTCCAAAGATGGTAACTTTACGTTGGGGTTCTTCACCCCTGAAAATTCTACAAATCGCTACGTTGGAATTTGGTGGAAGTCTCAATCCACAATCATATGGGTGGCTAACAGAAACCAACCACTGAATGATTCTGCAGGGATAGTCACAATATCTGATGATGGCAATCTTGTGGTATTGAGTGGACAGAAAAGAGTCATTTGGTCATCAAATGTGTCCATCACAGCATCCAACACCAGTTCTAAGTTTTCAGATTTTGGTAACCTTGTTCTTTTGAAAAGCACAAAGGGAAACATCTTATGCCAGAGTTTTCAGCAACCTTCAGATACATTACTGCCGGGTATGAAACTTTCAAGTAGCAGAAAAACAGGTAAGACTGTAAAACTTACATCATGGAAAAACCTTTCTAATCCACCAGTTGGGAGCTTCTCTTCTGGTCCTGTTGAACGCCTAAGTATACTTGAAGTGTTCATTTGGAATGAAACTCGACCCTATTGGCGCAGTGGTCCTTGGAATGGTGGGGTCTTTACAGGAATACAAGTAATGACAAGACCGTATCTTAAAGGATTTCGTGGTCGAGATGATGGGGAAGGAAATATTGAAATATATTATACAAGATCAAATGAGTTAAAATTTGCAATTTTTAACCTAAATTATCAAGGCCAATATGAAGAAAAATTGTGGGATGATGAGAAGAAAGAAGTGTATGTTGCATGGACTAGCCAAGAATCAAAATTTAATGTTTATGGTATATGTGGGGCATTTGCAAGCTGTAATTCACATAGCTCACCAATATGCAGCTGTTTGAAAGGGTTTGAACCAAAGAAGAAAGAGGAATGGAATAGACAAAACTGGACTAGTGGATGTGTTAGGAGGACACCTTTACAGTGTGAAAGAGTCAACAATCAAAACAAAAGTGTGGATTCAAAAGAAGATGGGTTTCTGAAATTGCAAATGGTTAGAGTACCAGATTTTGCAGAAGGGTCACCTGTTACACCAGAATTGTGCAGAAGCCAATGCTTGGAGAATTGCTCTTGCATTGCATATTCTCATGATACAGGGATAGGGTGTATGACTTGGACTAGGAATCTACTTGACATACAACAATTCTCGATTGGAGGACTTGATCTATATGTTCGTGTAGCCTACACGGAACTTGATAAAGGAACAGACACAAAAATTATCATTGCAATTGCAGTGATAATAGGAGCTGTCATAGTTGTCATTTGTGCATATATCATGTGGAGAAGAACTTCTAAAAACCAGGTAATTATATACCATCTTCTTGGATTCAAATTTAGTCATGATTATAGCTTACACTATGTTATGTTTCTCACTCCAGCTAAACTGCGACACTATATTAAATCAGCAAGGAAAAAGAACAACAAAGCTTTCCTACTTTTTAATAAAGTTGGAACATCAGAAAATGACAGCGTAATTGGAGAACTGTCACAAGTTAAACTCCAGGAGCTAGTACTCTTTGATTTTGAGAAGCTTGCATCTGCCACAAACAACTTCCACTTGTCCAACAAACTTGGACAGGGTGGTTTTGGTCCAGTTTACAAGCTGTTGTTTCTTAATATTTTTCTTCCAGGGGAAACTGCAAGACGATCAAGAAATGAAGTAGTGGTGATTTGTAAGCTTCAACACTGCAATCTTGTAAGGCTTCTTGGCTGCTGTATTGAAGGTGATGAAAAGATGTTGATATATGAGTACCTGCCTAACAAAAGTTTGGATGCTTTTGTCTTTGATCCATCAAAAAGTAAACTCCTAGATTGGAGGACGCGCTGTAGCATAATAGAAGGAATAGCTCGAGGATTGCTTTATCTTCATAGAGATTCTAGGCTAAAAATCATACACAGATTTGAAGGCAATGGTTATATGTCCCCTGAATATGCAATGCAAGGACTATTTTCAGAGAAATCAGATGTCTTTAGTTTCGGTGTTTTGATACTAGAGATTGTTAGTGGGAGAAGAAACTCAAGCTTTTATGACAATGAGTGTGCTCTTAGCCTTTCAGGATTTGCCTGGATACAATGGAGGGAAGGCAATATTTTATCTTTAATAGATCCAAGAATATATAATCCTTGTCATCATGAGCATATTTTAAGATGCATACACATAGGACTTCTGTGTGTACAAGAACTTGCTGTAGACAGGCCCACTATGGCTGCTGTAATTTCTATGCTTAATAGTGAAGTTGCATCTCTTCCTCCTCCTAGTCAACCTGCATTCATCCTGAGGCAGAATATGTTGAATTCGGCATCATCTGAAGAAAGTCAAAGATTATGTTCTATCAATACTCTTAGTATTACAGACATCTATGGTAGATAG 2988 0.3738 MSKPVNTDSVPTVNKKRLRVDPQSAPLVISAAENRSPSLLEKKDKSTKTLLKDVNSSADRLKDPKYGIQTVMDVDIIGNNRLRFKEREEKDEVVNLETKLDKNLQVFLQPKQVPVNRKINRIHDSDEEMTEEETTSSEESEDDEASMIKNKKKKKKRQWPFGSNCVNLNLFNSVMGFTFSSSANLFSVLFMLCCYLLHVGIAIDTITSSQFIKDPETLSSKDGNFTLGFFTPENSTNRYVGIWWKSQSTIIWVANRNQPLNDSAGIVTISDDGNLVVLSGQKRVIWSSNVSITASNTSSKFSDFGNLVLLKSTKGNILCQSFQQPSDTLLPGMKLSSSRKTGKTVKLTSWKNLSNPPVGSFSSGPVERLSILEVFIWNETRPYWRSGPWNGGVFTGIQVMTRPYLKGFRGRDDGEGNIEIYYTRSNELKFAIFNLNYQGQYEEKLWDDEKKEVYVAWTSQESKFNVYGICGAFASCNSHSSPICSCLKGFEPKKKEEWNRQNWTSGCVRRTPLQCERVNNQNKSVDSKEDGFLKLQMVRVPDFAEGSPVTPELCRSQCLENCSCIAYSHDTGIGCMTWTRNLLDIQQFSIGGLDLYVRVAYTELDKGTDTKIIIAIAVIIGAVIVVICAYIMWRRTSKNQVIIYHLLGFKFSHDYSLHYVMFLTPAKLRHYIKSARKKNNKAFLLFNKVGTSENDSVIGELSQVKLQELVLFDFEKLASATNNFHLSNKLGQGGFGPVYKLLFLNIFLPGETARRSRNEVVVICKLQHCNLVRLLGCCIEGDEKMLIYEYLPNKSLDAFVFDPSKSKLLDWRTRCSIIEGIARGLLYLHRDSRLKIIHRFEGNGYMSPEYAMQGLFSEKSDVFSFGVLILEIVSGRRNSSFYDNECALSLSGFAWIQWREGNILSLIDPRIYNPCHHEHILRCIHIGLLCVQELAVDRPTMAAVISMLNSEVASLPPPSQPAFILRQNMLNSASSEESQRLCSINTLSITDIYGR. 996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g02128 995 Gene3D Transferase(Phosphotransferase) domain 1 791 840 - -
Seca2g02128 995 Gene3D Transferase(Phosphotransferase) domain 1 842 955 - -
Seca2g02128 995 SMART blect_4 209 325 IPR001480 -
Seca2g02128 995 ProSiteProfiles Protein kinase domain profile. 724 995 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca2g02128 995 Pfam D-mannose binding lectin 249 351 IPR001480 -
Seca2g02128 995 Gene3D - 198 322 IPR036426 -
Seca2g02128 995 ProSiteProfiles Bulb-type lectin domain profile. 203 322 IPR001480 -
Seca2g02128 995 CDD PAN_AP_plant 511 600 - -
Seca2g02128 995 FunFam Os07g0541700 protein 791 843 - -
Seca2g02128 995 SMART ntp_6 527 599 IPR003609 -
Seca2g02128 995 MobiDBLite consensus disorder prediction 122 151 - -
Seca2g02128 995 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 188 939 - -
Seca2g02128 995 SUPERFAMILY Protein kinase-like (PK-like) 709 982 IPR011009 -
Seca2g02128 995 Pfam Protein tyrosine and serine/threonine kinase 845 947 IPR001245 GO:0004672|GO:0006468
Seca2g02128 995 Pfam Protein tyrosine and serine/threonine kinase 755 839 IPR001245 GO:0004672|GO:0006468
Seca2g02128 995 Gene3D Phosphorylase Kinase; domain 1 688 790 - -
Seca2g02128 995 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 199 322 - -
Seca2g02128 995 Pfam Domain of unknown function (DUF3403) 950 995 IPR021820 GO:0004674
Seca2g02128 995 Pfam PAN-like domain 527 585 IPR003609 -
Seca2g02128 995 CDD B_lectin 209 325 IPR001480 -
Seca2g02128 995 Pfam S-locus glycoprotein domain 384 493 IPR000858 GO:0048544
Seca2g02128 995 SUPERFAMILY alpha-D-mannose-specific plant lectins 241 355 IPR036426 -
Seca2g02128 995 ProSiteProfiles PAN/Apple domain profile. 515 600 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g02128 Seca-Chr2 49664639 49679251 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g02128 712 995 Receptor kinase-like Gene Family AT4G23140 44.348 2.12e-80 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Seca2g02128 PK_Tyr_Ser-Thr 6.7e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g02128 - - gmx:100779455 1130.93