Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca2g02128 | ATGAGCAAACCTGTGAATACAGATTCAGTTCCAACTGTCAACAAGAAAAGATTAAGGGTGGATCCTCAATCTGCACCTCTGGTTATTTCTGCAGCAGAAAATAGAAGTCCATCTTTGTTGGAAAAAAAAGACAAATCTACAAAAACATTGCTTAAAGATGTTAATTCTTCTGCTGACAGATTGAAAGATCCAAAGTATGGTATTCAGACAGTTATGGATGTTGACATAATAGGAAACAATAGACTCAGGTTTAAAGAAAGGGAGGAAAAGGATGAGGTTGTGAATCTTGAGACAAAACTGGATAAGAACCTACAAGTTTTTCTTCAGCCAAAACAAGTTCCAGTCAATAGGAAGATAAATCGTATACATGATTCTGATGAAGAAATGACTGAAGAAGAAACTACATCCAGTGAGGAATCTGAAGATGATGAGGCATCAATGATAAAGAACAAAAAAAAAAAAAAAAAAAGACAGTGGCCATTTGGATCAAACTGTGTTAATCTTAACCTATTCAATTCAGTAATGGGTTTCACTTTCAGTAGCAGTGCAAATTTGTTCTCTGTTTTGTTCATGCTGTGTTGTTATTTGTTACATGTTGGTATTGCAATAGACACCATCACATCATCTCAATTTATCAAGGACCCTGAGACTCTAAGCTCCAAAGATGGTAACTTTACGTTGGGGTTCTTCACCCCTGAAAATTCTACAAATCGCTACGTTGGAATTTGGTGGAAGTCTCAATCCACAATCATATGGGTGGCTAACAGAAACCAACCACTGAATGATTCTGCAGGGATAGTCACAATATCTGATGATGGCAATCTTGTGGTATTGAGTGGACAGAAAAGAGTCATTTGGTCATCAAATGTGTCCATCACAGCATCCAACACCAGTTCTAAGTTTTCAGATTTTGGTAACCTTGTTCTTTTGAAAAGCACAAAGGGAAACATCTTATGCCAGAGTTTTCAGCAACCTTCAGATACATTACTGCCGGGTATGAAACTTTCAAGTAGCAGAAAAACAGGTAAGACTGTAAAACTTACATCATGGAAAAACCTTTCTAATCCACCAGTTGGGAGCTTCTCTTCTGGTCCTGTTGAACGCCTAAGTATACTTGAAGTGTTCATTTGGAATGAAACTCGACCCTATTGGCGCAGTGGTCCTTGGAATGGTGGGGTCTTTACAGGAATACAAGTAATGACAAGACCGTATCTTAAAGGATTTCGTGGTCGAGATGATGGGGAAGGAAATATTGAAATATATTATACAAGATCAAATGAGTTAAAATTTGCAATTTTTAACCTAAATTATCAAGGCCAATATGAAGAAAAATTGTGGGATGATGAGAAGAAAGAAGTGTATGTTGCATGGACTAGCCAAGAATCAAAATTTAATGTTTATGGTATATGTGGGGCATTTGCAAGCTGTAATTCACATAGCTCACCAATATGCAGCTGTTTGAAAGGGTTTGAACCAAAGAAGAAAGAGGAATGGAATAGACAAAACTGGACTAGTGGATGTGTTAGGAGGACACCTTTACAGTGTGAAAGAGTCAACAATCAAAACAAAAGTGTGGATTCAAAAGAAGATGGGTTTCTGAAATTGCAAATGGTTAGAGTACCAGATTTTGCAGAAGGGTCACCTGTTACACCAGAATTGTGCAGAAGCCAATGCTTGGAGAATTGCTCTTGCATTGCATATTCTCATGATACAGGGATAGGGTGTATGACTTGGACTAGGAATCTACTTGACATACAACAATTCTCGATTGGAGGACTTGATCTATATGTTCGTGTAGCCTACACGGAACTTGATAAAGGAACAGACACAAAAATTATCATTGCAATTGCAGTGATAATAGGAGCTGTCATAGTTGTCATTTGTGCATATATCATGTGGAGAAGAACTTCTAAAAACCAGGTAATTATATACCATCTTCTTGGATTCAAATTTAGTCATGATTATAGCTTACACTATGTTATGTTTCTCACTCCAGCTAAACTGCGACACTATATTAAATCAGCAAGGAAAAAGAACAACAAAGCTTTCCTACTTTTTAATAAAGTTGGAACATCAGAAAATGACAGCGTAATTGGAGAACTGTCACAAGTTAAACTCCAGGAGCTAGTACTCTTTGATTTTGAGAAGCTTGCATCTGCCACAAACAACTTCCACTTGTCCAACAAACTTGGACAGGGTGGTTTTGGTCCAGTTTACAAGCTGTTGTTTCTTAATATTTTTCTTCCAGGGGAAACTGCAAGACGATCAAGAAATGAAGTAGTGGTGATTTGTAAGCTTCAACACTGCAATCTTGTAAGGCTTCTTGGCTGCTGTATTGAAGGTGATGAAAAGATGTTGATATATGAGTACCTGCCTAACAAAAGTTTGGATGCTTTTGTCTTTGATCCATCAAAAAGTAAACTCCTAGATTGGAGGACGCGCTGTAGCATAATAGAAGGAATAGCTCGAGGATTGCTTTATCTTCATAGAGATTCTAGGCTAAAAATCATACACAGATTTGAAGGCAATGGTTATATGTCCCCTGAATATGCAATGCAAGGACTATTTTCAGAGAAATCAGATGTCTTTAGTTTCGGTGTTTTGATACTAGAGATTGTTAGTGGGAGAAGAAACTCAAGCTTTTATGACAATGAGTGTGCTCTTAGCCTTTCAGGATTTGCCTGGATACAATGGAGGGAAGGCAATATTTTATCTTTAATAGATCCAAGAATATATAATCCTTGTCATCATGAGCATATTTTAAGATGCATACACATAGGACTTCTGTGTGTACAAGAACTTGCTGTAGACAGGCCCACTATGGCTGCTGTAATTTCTATGCTTAATAGTGAAGTTGCATCTCTTCCTCCTCCTAGTCAACCTGCATTCATCCTGAGGCAGAATATGTTGAATTCGGCATCATCTGAAGAAAGTCAAAGATTATGTTCTATCAATACTCTTAGTATTACAGACATCTATGGTAGATAG | 2988 | 0.3738 | MSKPVNTDSVPTVNKKRLRVDPQSAPLVISAAENRSPSLLEKKDKSTKTLLKDVNSSADRLKDPKYGIQTVMDVDIIGNNRLRFKEREEKDEVVNLETKLDKNLQVFLQPKQVPVNRKINRIHDSDEEMTEEETTSSEESEDDEASMIKNKKKKKKRQWPFGSNCVNLNLFNSVMGFTFSSSANLFSVLFMLCCYLLHVGIAIDTITSSQFIKDPETLSSKDGNFTLGFFTPENSTNRYVGIWWKSQSTIIWVANRNQPLNDSAGIVTISDDGNLVVLSGQKRVIWSSNVSITASNTSSKFSDFGNLVLLKSTKGNILCQSFQQPSDTLLPGMKLSSSRKTGKTVKLTSWKNLSNPPVGSFSSGPVERLSILEVFIWNETRPYWRSGPWNGGVFTGIQVMTRPYLKGFRGRDDGEGNIEIYYTRSNELKFAIFNLNYQGQYEEKLWDDEKKEVYVAWTSQESKFNVYGICGAFASCNSHSSPICSCLKGFEPKKKEEWNRQNWTSGCVRRTPLQCERVNNQNKSVDSKEDGFLKLQMVRVPDFAEGSPVTPELCRSQCLENCSCIAYSHDTGIGCMTWTRNLLDIQQFSIGGLDLYVRVAYTELDKGTDTKIIIAIAVIIGAVIVVICAYIMWRRTSKNQVIIYHLLGFKFSHDYSLHYVMFLTPAKLRHYIKSARKKNNKAFLLFNKVGTSENDSVIGELSQVKLQELVLFDFEKLASATNNFHLSNKLGQGGFGPVYKLLFLNIFLPGETARRSRNEVVVICKLQHCNLVRLLGCCIEGDEKMLIYEYLPNKSLDAFVFDPSKSKLLDWRTRCSIIEGIARGLLYLHRDSRLKIIHRFEGNGYMSPEYAMQGLFSEKSDVFSFGVLILEIVSGRRNSSFYDNECALSLSGFAWIQWREGNILSLIDPRIYNPCHHEHILRCIHIGLLCVQELAVDRPTMAAVISMLNSEVASLPPPSQPAFILRQNMLNSASSEESQRLCSINTLSITDIYGR. | 996 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca2g02128 | 995 | Gene3D | Transferase(Phosphotransferase) domain 1 | 791 | 840 | - | - | |
Seca2g02128 | 995 | Gene3D | Transferase(Phosphotransferase) domain 1 | 842 | 955 | - | - | |
Seca2g02128 | 995 | SMART | blect_4 | 209 | 325 | IPR001480 | - | |
Seca2g02128 | 995 | ProSiteProfiles | Protein kinase domain profile. | 724 | 995 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca2g02128 | 995 | Pfam | D-mannose binding lectin | 249 | 351 | IPR001480 | - | |
Seca2g02128 | 995 | Gene3D | - | 198 | 322 | IPR036426 | - | |
Seca2g02128 | 995 | ProSiteProfiles | Bulb-type lectin domain profile. | 203 | 322 | IPR001480 | - | |
Seca2g02128 | 995 | CDD | PAN_AP_plant | 511 | 600 | - | - | |
Seca2g02128 | 995 | FunFam | Os07g0541700 protein | 791 | 843 | - | - | |
Seca2g02128 | 995 | SMART | ntp_6 | 527 | 599 | IPR003609 | - | |
Seca2g02128 | 995 | MobiDBLite | consensus disorder prediction | 122 | 151 | - | - | |
Seca2g02128 | 995 | PANTHER | BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN | 188 | 939 | - | - | |
Seca2g02128 | 995 | SUPERFAMILY | Protein kinase-like (PK-like) | 709 | 982 | IPR011009 | - | |
Seca2g02128 | 995 | Pfam | Protein tyrosine and serine/threonine kinase | 845 | 947 | IPR001245 | GO:0004672|GO:0006468 | |
Seca2g02128 | 995 | Pfam | Protein tyrosine and serine/threonine kinase | 755 | 839 | IPR001245 | GO:0004672|GO:0006468 | |
Seca2g02128 | 995 | Gene3D | Phosphorylase Kinase; domain 1 | 688 | 790 | - | - | |
Seca2g02128 | 995 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 199 | 322 | - | - | |
Seca2g02128 | 995 | Pfam | Domain of unknown function (DUF3403) | 950 | 995 | IPR021820 | GO:0004674 | |
Seca2g02128 | 995 | Pfam | PAN-like domain | 527 | 585 | IPR003609 | - | |
Seca2g02128 | 995 | CDD | B_lectin | 209 | 325 | IPR001480 | - | |
Seca2g02128 | 995 | Pfam | S-locus glycoprotein domain | 384 | 493 | IPR000858 | GO:0048544 | |
Seca2g02128 | 995 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 241 | 355 | IPR036426 | - | |
Seca2g02128 | 995 | ProSiteProfiles | PAN/Apple domain profile. | 515 | 600 | IPR003609 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca2g02128 | Seca-Chr2 | 49664639 | 49679251 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca2g02128 | 712 | 995 | Receptor kinase-like Gene Family | AT4G23140 | 44.348 | 2.12e-80 | 274 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Seca2g02128 | PK_Tyr_Ser-Thr | 6.7e-07 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca2g02128 | - | - | gmx:100779455 | 1130.93 |