Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g02122 ATGTTGGTATTGCACACCATCACATCATCTCAATTCATCAAGGACCCTGAAACTCTAAGCTCCAAAGATGGCAACTTTATTTTGGGGTTCTTCAGCCCTGAAGATTCTACAAATCGTTACGTTGGAATTTGGTGGAAGTCTCAATCCACAATCATATGGGTGGCTAACAGAAACCAACCACTGAATGATTCTTCAGGGATTGTCACAATATCTGAAGATGGCAATCTTGTGGTATTGAATGGACAGAAACAAGTCATTTGGTCATCAAATGTGTCCAACATAACATCCAATACAAGTTCCCACTTTTCAGACTTTGGAAACCTTGTCCTTTCGGAAAGCACAAAAGGAAACATCTTATGGCAGAGTTTTCAGCATCCTTCCAATGTAATGTTGCCCGGTATGAAACTTACAAGCAACAAAAGAACAGGTGAGAAAGTAAAACTTACATCATGGAAAAACCTTTCTAATCCATCCGTTGGGAGCTTCTCTTTAGGCATTGCTGAACATCTAAACATCCTTGAAATTTTCATTTGGAATGAAACTCGACCATACTGGCGCAGTGGTCCGTGGAATGGTGTGGTCTTTACAGGAATACAAGAAATGACGACTTCTGGTGGTTTTCATTTTGGAGATGATGGGCGAGGAAATATTGATGTTTATTATAAAATATCAAATGAGGTGACATTCGTAATCTATAACCTGAATTCGCAAGGCATATCTCAAGAAAAATGGTGCTGTTTGAAAGGGTTTGAACCTAAGAACAAACATGAATGGAGTACACAAAACTGGACTGGTGGGTGTGTCAGGATGAAACCTTTGCAGTGTGAAAGAGTCAACAAACAAAACAAAAGTGTGGATACAAAAGCAGATGGGTTTCTGAAACTACAAATGGTTAAAGTACCAGATTTTGCAGAAAGGTCACCTATTACACCAGACATGTGCAGAAGCCAATGTTTGGAGAATTGCTCTTGCATTGCATATTCTCATGATGAAGGGATAGGATGTATGACTTGGACTAGGAATCTACTTGACATACAACAATTCTCGAGTAGAGGACTTGATCTATATGTTCGTGTAGCCTATACCGAACTTGACAAAGGAACAAACAAAAAACTCATCATTACAATTACAGTGATAATAGGAACTGTCATAATTGGCATTTGTGCATATATCATGTGGAGAAGGACTCCTCAGCAGCCAGCTAAACTGTGGCACTCTATTAAATCAGCAAGGAAAAAGAACAGAAAAGCTTTCCTATTTTTTAATAAAGTTGGAACATCAGAAAATGACAGCATAATTGGAGAACTGTCACAAGTTAAATTCCAGGATCTAGTACTCTTTGATTTTGAAAAGCTTGCATCTGCCACAAACAACTTCCACTTGTCCAACAAACTTGGACAGGGTGGTTTTGGTCCGGTATACAAGGGTAAACTGCAAGACGGTCAAGAAAAAGCAGTTAAAAGACTTTCTAGAGCATCTGGACAAGGGCTAGAAGAATTCAAGAATGAAGTAGTGGTGATTTGTAAGCTTCAACACTGCAATCTTGTAAGGCTTCTTGGCTGCTGTATTGAAGGTGATGAAAAGATGTTGATATATGAGTACCTGCCTAACAAAAGTTTGGATACATTTGTCTTCGATCCATCGAAAAGTAAACTCCTAGATTGGAGGATGCGTTGTAGCATAATAGAAGGAATAGCTCGAGGATTGCTTTATCTTCACAGAGATTCCAGACTAAGGATCATACACAGAGACTTGAAGGCAAGTAACATCTTGTTAGATGAGGAGTTGAATCCAAAAATATCAGACTTTGGAATGGCTAGAATTTTTGGACTGAGTGAAAGTCAGGCCAACACAAACAGAATTGTTGGAACTTATGGCTATATGTCCCCGGAATATGCAATGCAAGGACTATTTTCAGAGAAATCAGATGTCTTCAGCTTTGGTGTTTTGATACTAGAGATTGTTAGTGGAAGAAGAAACTCAAGCTTTTATGATAATGAGCATGCTCTGAGCCTTTTAGGATTTGCTTGGATACTGTGGAGGGAAGACAATATTTTGCCTTTAATAGATGTAGGAATTTATGATCCTAGTATTCATAAGCATATTTTAAGGTGCATACACATAGGACTTTTGTGTGTTCAGGAACATGCTGCAGACAGGCCCGTTATGGCTACAGTAATTTCTATGCTTAACAGTGAGGTTGCATTCCTTCCTCCTCCAAGTCAACCAGCATTCATCTTGAGGCAAAATATGTTGAGTCCAGTGTCTTCTAAAGAAAGTCATAGAGGTTGTTCAATCAATACAGTGAGCATTACGGAGATTTGTGGCAGATAG 2334 0.389 MLVLHTITSSQFIKDPETLSSKDGNFILGFFSPEDSTNRYVGIWWKSQSTIIWVANRNQPLNDSSGIVTISEDGNLVVLNGQKQVIWSSNVSNITSNTSSHFSDFGNLVLSESTKGNILWQSFQHPSNVMLPGMKLTSNKRTGEKVKLTSWKNLSNPSVGSFSLGIAEHLNILEIFIWNETRPYWRSGPWNGVVFTGIQEMTTSGGFHFGDDGRGNIDVYYKISNEVTFVIYNLNSQGISQEKWCCLKGFEPKNKHEWSTQNWTGGCVRMKPLQCERVNKQNKSVDTKADGFLKLQMVKVPDFAERSPITPDMCRSQCLENCSCIAYSHDEGIGCMTWTRNLLDIQQFSSRGLDLYVRVAYTELDKGTNKKLIITITVIIGTVIIGICAYIMWRRTPQQPAKLWHSIKSARKKNRKAFLFFNKVGTSENDSIIGELSQVKFQDLVLFDFEKLASATNNFHLSNKLGQGGFGPVYKGKLQDGQEKAVKRLSRASGQGLEEFKNEVVVICKLQHCNLVRLLGCCIEGDEKMLIYEYLPNKSLDTFVFDPSKSKLLDWRMRCSIIEGIARGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMARIFGLSESQANTNRIVGTYGYMSPEYAMQGLFSEKSDVFSFGVLILEIVSGRRNSSFYDNEHALSLLGFAWILWREDNILPLIDVGIYDPSIHKHILRCIHIGLLCVQEHAADRPVMATVISMLNSEVAFLPPPSQPAFILRQNMLSPVSSKESHRGCSINTVSITEICGR. 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g02122 777 ProSiteProfiles PAN/Apple domain profile. 275 360 IPR003609 -
Seca2g02122 777 ProSiteProfiles Protein kinase domain profile. 459 737 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca2g02122 777 CDD B_lectin 10 126 IPR001480 -
Seca2g02122 777 ProSitePatterns Serine/Threonine protein kinases active-site signature. 580 592 IPR008271 GO:0004672|GO:0006468
Seca2g02122 777 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 535 738 - -
Seca2g02122 777 Pfam D-mannose binding lectin 50 152 IPR001480 -
Seca2g02122 777 SMART blect_4 10 126 IPR001480 -
Seca2g02122 777 Pfam S-locus glycoprotein domain 185 243 IPR000858 GO:0048544
Seca2g02122 777 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 426 534 - -
Seca2g02122 777 CDD STKc_IRAK 465 731 - -
Seca2g02122 777 Gene3D Transferase(Phosphotransferase) domain 1 535 735 - -
Seca2g02122 777 SMART serkin_6 459 723 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca2g02122 777 PIRSF SRK 236 777 IPR024171 GO:0004674
Seca2g02122 777 PIRSF SRK 2 245 IPR024171 GO:0004674
Seca2g02122 777 Pfam Protein tyrosine and serine/threonine kinase 460 668 IPR001245 GO:0004672|GO:0006468
Seca2g02122 777 ProSiteProfiles Bulb-type lectin domain profile. 4 123 IPR001480 -
Seca2g02122 777 Pfam PAN-like domain 287 345 IPR003609 -
Seca2g02122 777 SUPERFAMILY alpha-D-mannose-specific plant lectins 42 156 IPR036426 -
Seca2g02122 777 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1 123 - -
Seca2g02122 777 Gene3D - 3 124 IPR036426 -
Seca2g02122 777 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 5 721 - -
Seca2g02122 777 Gene3D Phosphorylase Kinase; domain 1 424 534 - -
Seca2g02122 777 SMART ntp_6 287 359 IPR003609 -
Seca2g02122 777 SUPERFAMILY Protein kinase-like (PK-like) 444 759 IPR011009 -
Seca2g02122 777 CDD PAN_AP_plant 272 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g02122 Seca-Chr2 49563061 49566158 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g02122 447 777 Receptor kinase-like Gene Family AT4G11530 58.160 2.51e-126 391
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Seca2g02122 PK_Tyr_Ser-Thr 6.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g02122 - - tpra:123892366 1152.5