Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g02040 ATGGATAGTGTATCTCATTCTAGCCAAGAAAATGGAAGTTCCTCTCCTTTAGAAAATGAAGTTATTGTAACAGATTTAGCTCCATATGTTGGAATGGAATTTGAGACTGAAGAGCATGCATACAGGTATTATAATATGTTTGCTGGCTTTGTTGGTTTTAGTATTAGAAAAGAATGGGTCAACAAGAGCAAGGTGGATAAGAAGATAGTGTTATCTCGAAAATATTGTTGTTTTAAAGAAGGCTTTAAGAAGCAAACTAATTCTCAAGGAAAAAAGATTCGAAAAGATGTTCGAAATTGGTGTCTAGCTCAAATGGTCATTGCACGCCAACCTAATGAAAAATTTGTTGTTACATATTTTGAGAGTCAACATACTCATGTACTTGCAACGCCTCGTAGTAGACACAAGTTACCATCACAACGGAAGATTTCTATCGCTCAAGCAGCTCAAATTGAGCTAGCAAATCATTCTGGAGATGGAAGAAGGGGAGGCATGTACTTTGCTTCACTATTTCAGTCAAGGAAAGCTGAGAATTCATCGTTCTTTTTTTATGTTCAGCTTGATGTTGATGACCAAATTACTAATATATTTTGGACAGACGCAAAAATGGTTGTGGATTATGTTTATTTTGGAGATGTGTTATGTTTTGATACTACTTATCGTACTAACAAGAACTTTCGACCATTTGCACCCTTCCTTGGATTCAACCACCATCGAGAAACAGTGATATTTGGGGCTGCATTATTATATGATGAAACTGCAGATCCATTTGAATGA 777 0.3591 MDSVSHSSQENGSSSPLENEVIVTDLAPYVGMEFETEEHAYRYYNMFAGFVGFSIRKEWVNKSKVDKKIVLSRKYCCFKEGFKKQTNSQGKKIRKDVRNWCLAQMVIARQPNEKFVVTYFESQHTHVLATPRSRHKLPSQRKISIAQAAQIELANHSGDGRRGGMYFASLFQSRKAENSSFFFYVQLDVDDQITNIFWTDAKMVVDYVYFGDVLCFDTTYRTNKNFRPFAPFLGFNHHRETVIFGAALLYDETADPFE. 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g02040 258 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 9 257 IPR031052 GO:0006355
Seca2g02040 258 Pfam MULE transposase domain 213 257 IPR018289 -
Seca2g02040 258 Pfam FAR1 DNA-binding domain 42 129 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g02040 Seca-Chr2 44757707 44758595 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca2g02040 FAR1 3.9e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g02040 - K17604 tpra:123914859 311.997