Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g02039 ATGGAAATTCAAGCTGAGATTGTGTCTAAGCAAACCATAAAGCCATCCTCTCCAACCCCATCTCACCTCAGAGATTTCAAACTCTCCTTTCTTGATCAATTGGCACCTGAATCTTATGTCCCAGCTTTCCTCATATACTCTGCACATGATGTCACTAGTTCTGGCCTTGATTTTCCATCCTTGAGTGGAAAACTGAAGGCTTCCCTTTCAGATGTGCTATCTGTTTACTACCCTTTTTGTGGAAGGATCAAAGGGAATGCCTACATTGACTGCAATGATGCAGGGGTGCTTTACATTGAGGCCAGAATCCCCATCACTCTCAGTGATCTCCAACAAAATGTAAAGGTCAAAACTTTGAATCAATTTCTCCCAATTGATCCAATTGAACCAGCTGGTGGGCGTTTGAATAGTGAGGAACAAGTACTCTTGGCCATTCAGGTTACTGAACTCACTTGTGGTGCTGTAGGAATTGGTATTTGCATCCTACACAAGGTTGCTGATGGCACTGCCATGGGTTCATTCCTCAGTGCTTGGGGTGCAATAGCAAATGCAAGTGGTAACACAACAAAACCTTATATGGAAGCAAGTTTGCTTTTTCCAACAAGGGGTATTGATTTTTGTAGTCCATTTAGTGGTCGTGCTGATAACAACAAAGATGTTGCGACCACAAGATTGGTGTTTGATGGGGAAAGCTTGTCTAGGCTAAAAGCTGAAATTGAAGGTGGAAATTTCACAAGGGTTGAATCTATGACAGCTCTTATATGGAAGTTAATTATGGAGGCAGCCATAGCAAGTTCAAAGGAACAAAATCTTATTGTAAGGTCCTTTGCATCACAAGTGGTGAACATTCGTGGCCGCTTGGTGCAACCATTGCCAGAGTATTATGTTGGAAATGTTTGTCAACTTGCTGTTACTCCATTGGTTGAACTCCAAGTGGATAACAAGGTTGAGTTGAAGGATTTGGCAATGATGGTTAGGAAATCCATAATGAAATTTGATGCAGATTATGTGAGTGAACTTGGGGGTGATGCTGGTTATGATATGGTTATTGAATCCTTGAAACAAATAATACACAATTCTAAGGGTGTTAGGTGGTATGACTTTACTAGTTGGGTTAGATTTCCTTTATATGAAGCTGATTTTGGGTGGGGAAAACCAACTTGGGCAGGTAGTGTTTGTTTGCCAATGGAAAATTGCATCAAATTGTTGCCTACAAGAGATGGGGTAGGAATTGAGGCATGGGTGAACTTGACTAGGCAGGATATGGCTGAATTTCAGAACAACCCAAAGCTTCTCCAGTATGCATCGGTGTCACCTGTTTCTTTCTAA 1329 0.4153 MEIQAEIVSKQTIKPSSPTPSHLRDFKLSFLDQLAPESYVPAFLIYSAHDVTSSGLDFPSLSGKLKASLSDVLSVYYPFCGRIKGNAYIDCNDAGVLYIEARIPITLSDLQQNVKVKTLNQFLPIDPIEPAGGRLNSEEQVLLAIQVTELTCGAVGIGICILHKVADGTAMGSFLSAWGAIANASGNTTKPYMEASLLFPTRGIDFCSPFSGRADNNKDVATTRLVFDGESLSRLKAEIEGGNFTRVESMTALIWKLIMEAAIASSKEQNLIVRSFASQVVNIRGRLVQPLPEYYVGNVCQLAVTPLVELQVDNKVELKDLAMMVRKSIMKFDADYVSELGGDAGYDMVIESLKQIIHNSKGVRWYDFTSWVRFPLYEADFGWGKPTWAGSVCLPMENCIKLLPTRDGVGIEAWVNLTRQDMAEFQNNPKLLQYASVSPVSF. 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g02039 442 Pfam Transferase family 6 430 - -
Seca2g02039 442 PANTHER F21J9.9 6 436 - -
Seca2g02039 442 Gene3D - 218 435 IPR023213 -
Seca2g02039 442 Gene3D - 2 204 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g02039 Seca-Chr2 44527535 44528863 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g02039 3 426 Monolignol Biosynthesis Gene Families AT5G48930 26.144 3.02e-30 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g02039 - K13065 gmx:100792323 363.999