Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g02034 ATGGTCTTACACCACACACAAAAAAATAGTTCAGGGCTTGCTTCCAAGCGAACAAGAAGTAGCTTGGAAAGAGAAGAAAAGATGCTTGTCTACGAATTTGTAGCCAACAAAAGCGTTGACTATATCCTTTTTGATCCTGAAAAGCAAAGGTGGTTGGATTGGACAAGGCGTTACAAGATTATTCGAGGGATTGCTCGAGGCATTCAATACCTTCATGAAGATTCTAGGCTTAAAATTATTCACCGTGATGTCAAAGTTAGCAACATATTGTTGGATGGAGATATGAATCCAAAAATCTCAGATTTTGGCATGGCAAGAATATTTGGAGTGGATCAAACTCAAGAAAATACCAGCAAAATAGTAGGGACATAG 372 0.3844 MVLHHTQKNSSGLASKRTRSSLEREEKMLVYEFVANKSVDYILFDPEKQRWLDWTRRYKIIRGIARGIQYLHEDSRLKIIHRDVKVSNILLDGDMNPKISDFGMARIFGVDQTQENTSKIVGT. 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g02034 123 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 22 123 - -
Seca2g02034 123 FunFam Os07g0541700 protein 34 123 - -
Seca2g02034 123 Pfam Protein kinase domain 24 122 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca2g02034 123 ProSitePatterns Serine/Threonine protein kinases active-site signature. 79 91 IPR008271 GO:0004672|GO:0006468
Seca2g02034 123 SUPERFAMILY Protein kinase-like (PK-like) 23 123 IPR011009 -
Seca2g02034 123 Gene3D Transferase(Phosphotransferase) domain 1 17 123 - -
Seca2g02034 123 ProSiteProfiles Protein kinase domain profile. 1 123 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g02034 Seca-Chr2 44311880 44314519 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g02034 22 123 Receptor kinase-like Gene Family AT4G23190 78.431 7.76e-54 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Seca2g02034 Pkinase 4.3e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g02034 - - mtr:25485264 189.504