Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g01941 ATGCCTTTGTCTCCCTCCACCTCCATAACCAACCTTCGCCTTCGCACTCTCGTCTTCTTCAGAAAATGGACCACCAAAGACTATGCCATCGCCGCATTCGCCATCCTCATCCTCTTCTCCTTCCTCCTCCTCTCCCAATTGAATTCCCATCCTCACTCTCACTCCCTCCTCATTCCCTTCACTCCTCTCCGTAACGCCAACCAAAGAGGAGCACTTTGCTTGGACGGGAGTGCCCCCGGCTACCATTTCCAAAAGGGATTCGGATCTGGATCTCGCAATTGGTTGCTCCACGTCGAGGGAGGAGGGTGGTGTAATTCGATATCTTCGTGTTCTCGCCGAAAATTTACCGCTTTGGGTTCATCCAAGTATATGGAGACACTGGTTCCTTTTTCAGGAATTTTAAGCTCTGACCCCTCTCAAAATCCTGATTTCTTTAACTGGAACAAGGTGAAGATACGGTATTGTGATGGTGCATCTTTTGCTGGTCACCCAGAGAGTGAGCAGAAAGGGAGTGGGTTATTCTTCAGAGGCCAGATCATATGGGAAGCTATTATGGGTGAACTCTTATCAATTGGCATGTCTAAAGCAAAACAGGCTCTGCTTTCAGGATGCTCCGCTGGAGGGTTGGCAACTCTTATACATTGTGATGATTTCCGACAGTTACTTCCAAAGGAGGCCACTGTCAAGTGTCTTGCTGATGCAGGCTTCTTCCTAGATGAGAAGGATATTCTCGGAAATAGCACAATGAGATCTTTCTATCACGATGTTGTCCAGCTTCAGGGTGTTGCAAAAAGTCTGCACAAAGAATGCCTTGATAAAATGGAATCGTCTAAGTGTCTCTTTCCATCACAAATTCTTAGAAGCATAAAGACTCCAGTGTTCCTTGTTCACCCAGCTTATGATTTCTGGCAGATACACAATATTTTGGTACCTGAAGGATCAGATCCCCATGGTCACTGGAAAAGCTGCAGATTGAACATTCACAGTTGTAATGCTAACCTGATTGATATACTTGACCGTTTCCGTAGTTCTTTGCTGAAGTCTGTGAATGAATTCCAGCAACGAAAGGAGATTGGAATGTTTATAGATTCCTGCTTTATCCATTGCCAGACTTGGATGGGAGAGACATGGCATTCACCCAATTCACCTAAAATAAACGATAAGACAATTGCTGAATCTGTTGCTGATTGGTTCTTTAACCGAGATGTAGTAAAGCTGATCGACTGCCCTTATCCATGCAATCCTACTTGCCATAATATGGATTTCACAAGAGTATGA 1278 0.4484 MPLSPSTSITNLRLRTLVFFRKWTTKDYAIAAFAILILFSFLLLSQLNSHPHSHSLLIPFTPLRNANQRGALCLDGSAPGYHFQKGFGSGSRNWLLHVEGGGWCNSISSCSRRKFTALGSSKYMETLVPFSGILSSDPSQNPDFFNWNKVKIRYCDGASFAGHPESEQKGSGLFFRGQIIWEAIMGELLSIGMSKAKQALLSGCSAGGLATLIHCDDFRQLLPKEATVKCLADAGFFLDEKDILGNSTMRSFYHDVVQLQGVAKSLHKECLDKMESSKCLFPSQILRSIKTPVFLVHPAYDFWQIHNILVPEGSDPHGHWKSCRLNIHSCNANLIDILDRFRSSLLKSVNEFQQRKEIGMFIDSCFIHCQTWMGETWHSPNSPKINDKTIAESVADWFFNRDVVKLIDCPYPCNPTCHNMDFTRV. 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g01941 425 PANTHER NOTUM-RELATED 42 420 IPR004963 GO:0016787
Seca2g01941 425 Pfam Pectinacetylesterase 55 402 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g01941 Seca-Chr2 41260693 41268141 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g01941 13 389 Carbohydrate Esterase AT3G09410 58.612 9.50e-167 472
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g01941 K19882 - gmx:100792819 682.559