Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g01939 ATGGGTAACGGAATCGGAAATCTCTGCCTCTGCTCCGCCGGCGCCGGCGCCGGAGACAACTCCGGCAGGTTAGATAACAGCATTGCTTTCCTCTCCAAGCAATATGACAAAGCTATTGGCAACTCCATCTGCTATGTCAGACCAGACCCATGTCAGTTTTCCGGCGAAGGTTTTACCTTTTCCGATGATGACATCACCCTGATGACTTTCCGGTCAGTTTCCGGCGCCACCGTGAGTGCAAACTCGTCAGCAACACCTTCCACTTCCCTTGATGACTCTCTTCAACACAGCATCGTTTTGGATTCCTCTGCTTCGTTTGAGAGCTCTGGTTCCTTCACTTCCACGATGGTGCCTCTGCAACTGCAGCATCAACATGCTTCTCGTGGCTTCTCTGTAGGTAGCACCGTGGAAAAAGGGTTATCTTGGGGTCCTAACGTGGGTGGCTTTGTGCAAAGTCCTTGTGATCCTGTGTTCAATGGTTCTGAACATGTGAAGAAGCTGAGGAGAAGCTTGTCTCATAGTGGATATGAGTTTGAGAACAAACACAGAAAGCTCAGCTTGAAGAAGGTTCTGAGTAAAGCGTTTTTAAGCACATTATCTCTTGGGAAAAGGTCCATTCTCAAGAAAAAGGATAATGGTAATGCCAGAGTGAGTTGTAGTACTAGCTTGAGTGATGAATTGAGATTGCATGGTGTTGAGGGTGATAATAATAACTATTTGGAAGATGATGGTGGATGTGGTTTGTTAATGGGGTGTCAGAATCTTCATTGGGCTCAAGGTAAAGCTGGTGAGGATCGTGTGCATATTGTGATTTGTGAGAATCATGGATGGGTTTTTGTAGGGATTTATGATGGGTTTAATGGCCCTGATGCAACTGATTATCTTCTTAATAATCTGTTTTATGCTGTACATGATGAGCTCAAGGAGATACTGTGTAGTCACAAGTCTGAATCCATGGAGAAAGTGTTGTTATCAGTTAAGGGAAATGGGGTGGTTGATAAAGAAAACTATCCAATAGTAAATGAAAAGTCAAATTTGGATTGTGTGTCAAAGAGAGTAGTGGGAATGAATAGGAGGAATGGTGATAATAAAGAGGTTAGAATGATGTGGGAATGTGAAGGGGATGGTGAAAAAATGGACCTTGAAAAGAGGGTGGAGGTAAACTTGAGTCTTGCACAAGAAGAAAGTGCAGCAGATTTTAGCCACTCAGATGTGTTACAAGCTCTTTCAGAGGCATTGAGGAAGACTGAGGATGCATTTTTGAAGACTTCTGATGATATGATTACACTTAATCCTGTGTTGGCTATGATGGGTTCTTGTGTTTTGGTAATGATGATGAAGGGAGAAGATGTTTACTTGATGAATGTGGGAGATAGCCGAGCTGTCTTAGCAACACAGACTGGGAATTCCCTTCAGCTCACCATGGAGCATAGTACTCATGTGAAAGAGGAGGTTTATAGAATCAGGAAGGAGCACCCAGATGACCCTTCTGCAGTAACTAAAGGCCGGGTGAAAGGTTACTTGAGTGTCACAAGGGCTTTTGGGGCTGGGTTCCTTAAGCAGCCTAAACAGAACAATGCAGTGTTAGAGACTTTCAAAGTAAGCTACATAGGGGAATCCCCATATATCACTTGTTGCCCTTCCCTCCACCACCACAGGCTCAGCCCAAATGACAAATTTCTGATACTATCTTCTGATGGACTTTACCAATACTTCACCAATGAAGAAGCAGTTGCCAAAGTAGAGACATTTATCTCTATGTTTCCAGATAGAGATCCTGCACAACTTCTCATTGAAGAAGCACTAACTAGAGCAGCCAAAAAAGCTGGTATGGAGTTCCATGAGCTACTTGAAATCCCACAAGGGGAAAGGCGTCTTTACCATGATGACATTTCTATTGTCATAATCTCCTTGGAGGGAAAAATATGGCGTTCATTTGTGTAA 1944 0.4357 MGNGIGNLCLCSAGAGAGDNSGRLDNSIAFLSKQYDKAIGNSICYVRPDPCQFSGEGFTFSDDDITLMTFRSVSGATVSANSSATPSTSLDDSLQHSIVLDSSASFESSGSFTSTMVPLQLQHQHASRGFSVGSTVEKGLSWGPNVGGFVQSPCDPVFNGSEHVKKLRRSLSHSGYEFENKHRKLSLKKVLSKAFLSTLSLGKRSILKKKDNGNARVSCSTSLSDELRLHGVEGDNNNYLEDDGGCGLLMGCQNLHWAQGKAGEDRVHIVICENHGWVFVGIYDGFNGPDATDYLLNNLFYAVHDELKEILCSHKSESMEKVLLSVKGNGVVDKENYPIVNEKSNLDCVSKRVVGMNRRNGDNKEVRMMWECEGDGEKMDLEKRVEVNLSLAQEESAADFSHSDVLQALSEALRKTEDAFLKTSDDMITLNPVLAMMGSCVLVMMMKGEDVYLMNVGDSRAVLATQTGNSLQLTMEHSTHVKEEVYRIRKEHPDDPSAVTKGRVKGYLSVTRAFGAGFLKQPKQNNAVLETFKVSYIGESPYITCCPSLHHHRLSPNDKFLILSSDGLYQYFTNEEAVAKVETFISMFPDRDPAQLLIEEALTRAAKKAGMEFHELLEIPQGERRLYHDDISIVIISLEGKIWRSFV. 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g01939 647 CDD PP2Cc 261 638 IPR001932 -
Seca2g01939 647 Gene3D - 236 644 IPR036457 -
Seca2g01939 647 SMART PP2C_4 248 636 IPR001932 -
Seca2g01939 647 PANTHER PROTEIN PHOSPHATASE 2C 214 636 IPR015655 GO:0004722|GO:0006470
Seca2g01939 647 SUPERFAMILY PP2C-like 260 639 IPR036457 -
Seca2g01939 647 ProSiteProfiles PPM-type phosphatase domain profile. 247 638 IPR001932 -
Seca2g01939 647 Pfam Protein phosphatase 2C 391 607 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g01939 Seca-Chr2 41206386 41208997 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g01939 1 647 PP2C-type Phosphatase Gene Family AT1G07630 46.479 0.0 558
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g01939 - K01102 gmx:100794388 826.624