Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g01928 ATGGCTGCTACTTTTGATTCCTCATTTAACACTCCAAAAACTGTTAAATCTTGCACTACTCCTAAGAAACCTTCCAACAACCCCATTTCAGTTTCCAAGGTCAGGGTCATCGTCAGGGTAAGGCCCTTCATTTCTCACGAAATCTCAGCAAGAAATGGTCACCCTGTTTCATGTATCTCCGTCTTGGACCAAGATTTTGAATCTCCAGAAGGAGAAGTAGCCGTTTATCTCAAAGACCCAGAAACCAGCCGAAATGAGTGCTACCAGTTGGACTCTTTCTTTGCACAACAAGATAACAATGTGGGTCAGATATTCTGCAAAGAAGTAAGCCCCATGATACCAGGAATCTTTAATGGCTGCAATGCCACTGTGTTTGCTTATGGGGCTACTGGAAGTGGGAAGACATACACCATGCAGGGAACTGAAGAACAACCTGGCTTGATGCCACTGGCAATGTCCACGATCCTGTCTATTTGCCAAAGCACTGGCAGCACAACACAGATTTCATACTATGAGGTCTACATGGACCGATGTTATGACCTCTTGGAGGTCAAAGCAAAAGAAATTTCAGTTTGGGATGACAAAGATGGGCAAGTTCATCTCCGGGGACTATCTCAGGTTCCTATAAACACAATGTCTGAATTTCAGGAGGTTTTCTCCTGTGGAGTTCAGAGACGTAAAGTTGCACACACAGGCCTCAATGATGTCTCCAGTAGGAGTCATGGAGTGCTTGTGATATCTGTATCCACTCCTTCTTCTGATGGAACTGCAAGCACCATATGTGGAAAGCTGAATCTCATAGACTTGGCAGGTAATGAAGACAACAGAAGGACCTGCAATGAAGGGATTCGTCTCCAAGAGAGTGCCAAAATAAACCAATCCTTGTTTGCACTGTCAAATGTGATATATGCATTGAACAACAACAAACCAAGAGTACCCTACAGAGAAAGCAAATTGACCCGTATATTGCAGGACTCTCTTGGGGGAACTAGTCATGCACTGATGGTTGCTTGTCTGAATCCAGGAGAATACCAGGAATCTGTTCATACTGTTAGTTTGGCTGCTCGATCAAGGCATATCTCTAATTTTGTACCTTCAGCTCATAAACAAGAGACCCCAAAAGTTAAAGTTGACATGGAAGCCAAATTGAGAGCTTGGCTAGAATCAAAAGGCAAAACAAAGAGTTCTCAAAGACTTGGGGCATTTAATTCTCCACTTTTGAAGAAAACTCCCAGTTCCATCATTACCCCTGCTAAGAGATGTGTTACCTTTAATAGTTCAGTGACGGGGGGAAGAACTGCCATCAACCAAGATGCTCAACAACATACAAACGAAAGGGCCTTTGCTGTGGCTTTTAGAAATTTACTAGATGGTGAAGGTCCTTTTGATTCTTGCATGGAGGACCTACATTGTGGTGTTAAGGACAATAATAACAGAGAGACTGAGCATGATACCAATAAGGCTGCATGGGAATCATGTAAAAATATGCCTGCTTGGTATAGTGATTGTAGTATTGTACTTGCTAAAGCTTTGAGCAACATGTGTTTGTTGTATGCAGTTGAGCCATTGAGCAAGGGAATGAACTCGCCAATTACAAATGAGAGTAAAAATGCAGTACAAAGTCCTTTAAGAAAAGCCCTCTCCCCCATCAACATCAATGGTAATCAAAAGTCCCTTGAGGCACTGTCTTTGACACACACACCTTTTGCAACCTGCTCCACTAATAAAGGGTTACAAAAGAATGGCACTCCACTTGACAAATTCAGTACACGAAGTTCTAAACTGAAGAACTGTCTAGTTCAAGAATACATTGATTTCTTAAATAATGCAAGCAGAGAGGAACTACTAGAGTTAAAGGGCATAGGAGAGAAAATGGCAGAATACATAATAGACCTTAGAGAAGAAAGCCCAATAAAATCGTTAAGTGATTTGGAGAAGATTGGTCTCTCTTCAAAGCAGGCCCATAACCTGTTCACTAAAGCTGCAAAGAAACTATTCGAAGATAAAGCAGAAGATTCAATACTCAGTTGA 2031 0.4185 MAATFDSSFNTPKTVKSCTTPKKPSNNPISVSKVRVIVRVRPFISHEISARNGHPVSCISVLDQDFESPEGEVAVYLKDPETSRNECYQLDSFFAQQDNNVGQIFCKEVSPMIPGIFNGCNATVFAYGATGSGKTYTMQGTEEQPGLMPLAMSTILSICQSTGSTTQISYYEVYMDRCYDLLEVKAKEISVWDDKDGQVHLRGLSQVPINTMSEFQEVFSCGVQRRKVAHTGLNDVSSRSHGVLVISVSTPSSDGTASTICGKLNLIDLAGNEDNRRTCNEGIRLQESAKINQSLFALSNVIYALNNNKPRVPYRESKLTRILQDSLGGTSHALMVACLNPGEYQESVHTVSLAARSRHISNFVPSAHKQETPKVKVDMEAKLRAWLESKGKTKSSQRLGAFNSPLLKKTPSSIITPAKRCVTFNSSVTGGRTAINQDAQQHTNERAFAVAFRNLLDGEGPFDSCMEDLHCGVKDNNNRETEHDTNKAAWESCKNMPAWYSDCSIVLAKALSNMCLLYAVEPLSKGMNSPITNESKNAVQSPLRKALSPININGNQKSLEALSLTHTPFATCSTNKGLQKNGTPLDKFSTRSSKLKNCLVQEYIDFLNNASREELLELKGIGEKMAEYIIDLREESPIKSLSDLEKIGLSSKQAHNLFTKAAKKLFEDKAEDSILS. 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g01928 676 Gene3D Kinesin motor domain 30 401 IPR036961 -
Seca2g01928 676 Gene3D - 593 664 - -
Seca2g01928 676 PRINTS Kinesin heavy chain signature 119 140 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca2g01928 676 PRINTS Kinesin heavy chain signature 231 248 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca2g01928 676 PRINTS Kinesin heavy chain signature 312 333 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca2g01928 676 PRINTS Kinesin heavy chain signature 263 281 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca2g01928 676 MobiDBLite consensus disorder prediction 1 27 - -
Seca2g01928 676 FunFam Kinesin-like protein 30 400 - -
Seca2g01928 676 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 32 404 IPR027640 GO:0003777|GO:0007018
Seca2g01928 676 CDD KISc_KID_like 34 358 - -
Seca2g01928 676 Pfam Kinesin motor domain 39 360 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca2g01928 676 SMART kinesin_4 31 368 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca2g01928 676 Pfam Helix-hairpin-helix motif 607 647 - -
Seca2g01928 676 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 33 386 IPR027417 -
Seca2g01928 676 FunFam Kinesin-like protein KIN-10C 593 665 - -
Seca2g01928 676 ProSiteProfiles Kinesin motor domain profile. 33 360 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca2g01928 676 SUPERFAMILY RuvA domain 2-like 602 649 IPR010994 -
Seca2g01928 676 ProSitePatterns Kinesin motor domain signature. 262 273 IPR019821 GO:0003777|GO:0005524|GO:0007018
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g01928 Seca-Chr2 40943749 40948376 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g01928 33 399 Calmodulin-binding Proteins AT5G65930 32.891 4.32e-46 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g01928 K10403 - gmx:100804591 1051.2