Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g01927 ATGGCTGAGGTGAAATCAGAGGAGTGTTGTTTGGAGAATAAGCAATCTACTGCTGCTTCTTGCTCCTCTGTATCTGAAGGCAGTGGCAGTGCAATTCACAAGTCTCCAGGAATGTGTAGCCCAGCATCGACATCGCCCTCACATAAGAGAACCACTGGCCCTATAAGGCGTGCTAAAGGTGGTTGGACAGCAGAGGAGGATGAGACATTAAGGAATGCTGTTGCAGCTTTTAAGGGAAAGAGTTGGAAGAAAATAGAATATAAGGTATCCATGAGGAACACTAAGAAGGCAGTGAGCAAAGAGAAACCTAGAGCATTTGATGGGTTATACCGATCCTTAGTTACCAAAAGTGGGGAAAGAATGAAAGATGTATCTACAAGCTTGCTAAAGGTTGAGAAAGAAAAGCAACTGACTTGA 417 0.4388 MAEVKSEECCLENKQSTAASCSSVSEGSGSAIHKSPGMCSPASTSPSHKRTTGPIRRAKGGWTAEEDETLRNAVAAFKGKSWKKIEYKVSMRNTKKAVSKEKPRAFDGLYRSLVTKSGERMKDVSTSLLKVEKEKQLT. 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g01927 138 CDD SANT 62 92 IPR001005 -
Seca2g01927 138 MobiDBLite consensus disorder prediction 11 30 - -
Seca2g01927 138 Pfam Myb-like DNA-binding domain 59 89 IPR001005 -
Seca2g01927 138 Gene3D - 54 122 - -
Seca2g01927 138 MobiDBLite consensus disorder prediction 37 51 - -
Seca2g01927 138 MobiDBLite consensus disorder prediction 1 64 - -
Seca2g01927 138 ProSiteProfiles Myb-like domain profile. 54 96 IPR001005 -
Seca2g01927 138 SUPERFAMILY Homeodomain-like 55 93 IPR009057 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g01927 2 85 MYB Transcription Factor Family AT3G09370 70.115 6.08e-35 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Seca2g01927 Myb_DNA-binding 1.5e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g01927 K09422 - gmx:100793280 149.443