Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g01869 ATGGTTGAGTCAGCCATGTCAAAGACAATGATGGAGGAAGTAATGGCTACTTGGTCAGAAGGGTCAGAGGATGACCTTGTTAGAGAGCTTTTAGATGATGGGTCTCCTCCTCTTATGCTGCCAGAGGTAACTGAACCCAACACAAGAGCTTCTTTAAGAGACCAAGCTTTTAATAGGTTCATCTCCAACATTTACTCAGGACCTACCATCACTGATATTGAGAATGCCTTATCATCAGTGACCAACCAAAGAGAGCACTTTCAACAACTCTCATCAACCAGAGTTTCCATATTGGAAAGGAGTTTGAGTAAGATTGAGAATAAGTATACCCTGAAAATCAAATGCTTTGGCAATGGGATGGGTGATGATGGATATAAGTGGAGGAAGTATGGGCAGAAATCCATTAAGAATAGCCCAAATCCTAGGAGTTACTATAGGTGCACCAACCCAAGATGCAGTGCCAAGAAACAAGTTGAGAGATCCAATGAGGACCCTGACACTCTTATCATCACCTATGAAGGGCTCCACCTGCACTTTGCATACCCATATTTCCTTGTGGGCCAATCACAGCAATCTCATTCCTATCCACCAATCAAGAAGTCCAAGCCTACCTCTTCACAAGCCCAAGCCCAAGACCATACAGCACACCATGTTTATGAAGGCCAACATGCCCAGGAAGCCCAAGGTACTGTTTCTTTGGGCCTGATCTCACCCACTTTATTGGACGCTCCACAGGACATGGCCCAAGAAAATTTGGGGTCACAAGGGTTGCTTGAAGACATGGTGCCATTCATGGTTAGGAACCCCACAAACAATGTCAATAGTGCTTACTCAACATTTTCTTGTTCCACCCATCCAACGTCACCTCCTCTGTGGACTTCTGGTTATTCCACCTCCTGTTATACCGTTGGCTTGAATTCTAGCATTTAG 930 0.4473 MVESAMSKTMMEEVMATWSEGSEDDLVRELLDDGSPPLMLPEVTEPNTRASLRDQAFNRFISNIYSGPTITDIENALSSVTNQREHFQQLSSTRVSILERSLSKIENKYTLKIKCFGNGMGDDGYKWRKYGQKSIKNSPNPRSYYRCTNPRCSAKKQVERSNEDPDTLIITYEGLHLHFAYPYFLVGQSQQSHSYPPIKKSKPTSSQAQAQDHTAHHVYEGQHAQEAQGTVSLGLISPTLLDAPQDMAQENLGSQGLLEDMVPFMVRNPTNNVNSAYSTFSCSTHPTSPPLWTSGYSTSCYTVGLNSSI. 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g01869 309 ProSiteProfiles WRKY domain profile. 116 181 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca2g01869 309 Pfam WRKY DNA -binding domain 122 178 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca2g01869 309 Gene3D WRKY domain 117 174 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca2g01869 309 SUPERFAMILY WRKY DNA-binding domain 119 178 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca2g01869 309 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 95 216 IPR044810 GO:0003700
Seca2g01869 309 FunFam WRKY transcription factor 107 182 - -
Seca2g01869 309 SMART WRKY_cls 121 180 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g01869 Seca-Chr2 38437336 38440038 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g01869 11 272 WRKY Transcription Factor Family AT5G43290 41.696 5.38e-56 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Seca2g01869 WRKY 6e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g01869 - - gmx:100810459 475.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g01869 2 38437336 38440038 Seca2g01869 2 38437336 38440038 ECH