Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g01844 ATGAAAAGAGGTAAGATGAAGATCGATGAGGATCTGGGTCCTGATCGTGAAGATGACTTTCAAACTGATGATGAAGAAAATCAGGCACATAGGGTGTTTGAAAATTTGGATGATGATACTGAGTCAGATAATTCACCCCCTTCACGAAATTTGTCTAATGAGGTTGCCGCTAGTCCCTCTTGGCCTCAAAGTTATAGGCAATCTATGGACATGTTAACTACTGTAAGTGTAACACCACCTGGATTCACTCTCCTAAGGAGAATTAGTTCATCAGGGAGAGGTTCAGCATTCAAGAGATCTCAAGAATGCCAAACTGATTCTTCTTTGACTATACCTCTTGTTGGAGAGACAATTAGTTCAATCAATCAAGAGGAGACTACCTCAACATCCCATGTGCAATCACTTGTACCTAGCTGTGCGAATTTTTCTATCACTGAATTGCCACCACCACAAGAACAATGTTCATTTGCACAATCAGTAATTAATGGTACCAATATATTATGTGGGATAGGAATTCTTACTATCCCATATGCAGTAAAAGAAGGAGGGTGGTTGAGCCTTATAATACTTCTATTGTTTGCTATCATTTGTTGTTATACTGGGATTTTGTTAAAGAGATGTCTAGAGAACAACACTGGACTCAAATCTTACCCAGATATTGGCCAGGCTGCTTTTGGAATTGCTGGTCGCTTGGTGATTGCGATCCTTTTGTATGTGGAATTGTTTGCTTCATGTGTTGAGTATATAATACTAGTCAGTGATAATCTCGCATCACTTTTTCCTAATACTCACATGAGATTTGCTGGAATTGATTTTGGTACACATCAAATTTTTGCCATCACAGCAGCTATTCTTGTTCTACCAACAGTTTGGCTGAAAAATCTAAGCCTGCTTTCTTATATTTCAGTTGGAGGAATATTTGCAACAATAGCTGTTGCATTATGCTTGTTTTGGGTTGGGGTGATAGATAACCAAGTTGGATCTAAGCCAGGAGGAAAAATTTTAAACCTGTCACACCTATCTGTCTCAATTGGTGTTTTTGGTTTTGGCTTTGCTGGCCATGCAGTTTTTCCAAACATTTACTCTTCAATGAAGGAACCATCGAAATTCCCATCAGTTATATGTATCAGGTAA 1134 0.3862 MKRGKMKIDEDLGPDREDDFQTDDEENQAHRVFENLDDDTESDNSPPSRNLSNEVAASPSWPQSYRQSMDMLTTVSVTPPGFTLLRRISSSGRGSAFKRSQECQTDSSLTIPLVGETISSINQEETTSTSHVQSLVPSCANFSITELPPPQEQCSFAQSVINGTNILCGIGILTIPYAVKEGGWLSLIILLLFAIICCYTGILLKRCLENNTGLKSYPDIGQAAFGIAGRLVIAILLYVELFASCVEYIILVSDNLASLFPNTHMRFAGIDFGTHQIFAITAAILVLPTVWLKNLSLLSYISVGGIFATIAVALCLFWVGVIDNQVGSKPGGKILNLSHLSVSIGVFGFGFAGHAVFPNIYSSMKEPSKFPSVICIR. 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g01844 377 MobiDBLite consensus disorder prediction 45 60 - -
Seca2g01844 377 MobiDBLite consensus disorder prediction 23 44 - -
Seca2g01844 377 MobiDBLite consensus disorder prediction 1 60 - -
Seca2g01844 377 PANTHER OS05G0424000 PROTEIN-RELATED 161 375 - -
Seca2g01844 377 Pfam Transmembrane amino acid transporter protein 154 373 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g01844 Seca-Chr2 36539042 36541667 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g01844 6 376 Amino Acid or Auxin Permease AAAP Family AT5G02180 50.769 6.79e-128 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g01844 K15015 - cave:132161847 433.721